RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 NLRP6P59044 892 aa10.33□□□□□ -0.76
LDB3-201ENST00000263066 SASS6Q6UVJ0 657 aa10.33□□□□□ -0.76
LDB3-201ENST00000263066 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
LDB3-201ENST00000263066 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.33□□□□□ -0.76
LDB3-201ENST00000263066 ZMYM3Q14202 1370 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 A2MP01023 1474 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 ZC3H6P61129 1189 aaKnown RBP10.32□□□□□ -0.76
LDB3-201ENST00000263066 KIAA1107Q9UPP5 1409 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 KTN1Q86UP2 1357 aaKnown RBP10.32□□□□□ -0.76
LDB3-201ENST00000263066 TNNT1P13805 278 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 FAM193AP78312 1265 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 GPATCH11Q8N954 259 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 CFAP53Q96M91 514 aa10.32□□□□□ -0.76
LDB3-201ENST00000263066 TSC1Q92574 1164 aa10.31□□□□□ -0.76
LDB3-201ENST00000263066 STRN4Q9NRL3 753 aa10.31□□□□□ -0.76
LDB3-201ENST00000263066 ADAMTS2O95450 1211 aa10.31□□□□□ -0.76
LDB3-201ENST00000263066 MROH1Q8NDA8 1641 aa10.31□□□□□ -0.76
LDB3-201ENST00000263066 DDX17Q92841 729 aaKnown RBP10.31□□□□□ -0.76
LDB3-201ENST00000263066 CHMP4CQ96CF2 233 aa10.31□□□□□ -0.76
LDB3-201ENST00000263066 TERF2IPQ9NYB0 399 aa10.31□□□□□ -0.76
LDB3-201ENST00000263066 ABTB2Q8N961 1025 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 CDK19Q9BWU1 502 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 PPRC1Q5VV67 1664 aaKnown RBP10.3□□□□□ -0.76
LDB3-201ENST00000263066 ABCA9Q8IUA7 1624 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 TIGD1Q96MW7 591 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 EVC2Q86UK5 1308 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 ADGRL2O95490 1459 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 TEX14Q8IWB6 1497 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 SKOR2Q2VWA4 1001 aaPredicted RBP10.3□□□□□ -0.76
LDB3-201ENST00000263066 PPP6R1Q9UPN7 881 aa10.3□□□□□ -0.76
LDB3-201ENST00000263066 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
LDB3-201ENST00000263066 RBM25P49756 843 aaKnown RBP10.29□□□□□ -0.76
LDB3-201ENST00000263066 SYTL4Q96C24 671 aaPredicted RBP10.29□□□□□ -0.76
LDB3-201ENST00000263066 ISY1Q9ULR0 285 aaKnown RBP10.29□□□□□ -0.76
LDB3-201ENST00000263066 BCORL1Q5H9F3 1711 aa10.29□□□□□ -0.76
LDB3-201ENST00000263066 ELL2O00472 640 aaPredicted RBP10.29□□□□□ -0.76
LDB3-201ENST00000263066 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
LDB3-201ENST00000263066 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
LDB3-201ENST00000263066 MYO5CQ9NQX4 1742 aa10.29□□□□□ -0.76
LDB3-201ENST00000263066 EVA1CP58658 441 aa10.29□□□□□ -0.76
LDB3-201ENST00000263066 RNF214Q8ND24 703 aa10.29□□□□□ -0.76
LDB3-201ENST00000263066 HMOX1P09601 288 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 RIMBP3CA6NJZ7 1639 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 RIMBP3BA6NNM3 1639 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 RIMBP3Q9UFD9 1639 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 CLGNO14967 610 aa10.28□□□□□ -0.76
LDB3-201ENST00000263066 HMGN5P82970 282 aaKnown RBP10.27□□□□□ -0.76
LDB3-201ENST00000263066 NOS1P29475 1434 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 TNRQ92752 1358 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 UBAP1LF5GYI3 381 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 KIF7Q2M1P5 1343 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 GOLGA6L6A8MZA4 724 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 KCNA6P17658 529 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 LTKP29376 864 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 ARHGEF5Q12774 1597 aa10.27□□□□□ -0.77
LDB3-201ENST00000263066 KCNA4P22459 653 aa10.26□□□□□ -0.77
LDB3-201ENST00000263066 TMX1Q9H3N1 280 aa10.26□□□□□ -0.77
LDB3-201ENST00000263066 KAT6BQ8WYB5 2073 aa10.26□□□□□ -0.77
LDB3-201ENST00000263066 DEPDC5O75140 1603 aa10.26□□□□□ -0.77
LDB3-201ENST00000263066 ZSCAN20P17040 1043 aaPredicted RBP10.26□□□□□ -0.77
LDB3-201ENST00000263066 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
LDB3-201ENST00000263066 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
LDB3-201ENST00000263066 COG3Q96JB2 828 aa10.26□□□□□ -0.77
LDB3-201ENST00000263066 MAST1Q9Y2H9 1570 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 KDM5DQ9BY66 1539 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 ANKRD30BQ9BXX2 1392 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
LDB3-201ENST00000263066 CAVIN1Q6NZI2 390 aaKnown RBP10.25□□□□□ -0.77
LDB3-201ENST00000263066 HOMEZQ8IX15 550 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 CCDC39Q9UFE4 941 aa10.25□□□□□ -0.77
LDB3-201ENST00000263066 UNC13BO14795 1591 aa10.24□□□□□ -0.77
LDB3-201ENST00000263066 GTF2A1P52655 376 aaPredicted RBP10.24□□□□□ -0.77
LDB3-201ENST00000263066 ROCK1Q13464 1354 aa10.24□□□□□ -0.77
LDB3-201ENST00000263066 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
LDB3-201ENST00000263066 EIF3AQ14152 1382 aaKnown RBP10.24□□□□□ -0.77
LDB3-201ENST00000263066 MAGI2Q86UL8 1455 aa10.24□□□□□ -0.77
LDB3-201ENST00000263066 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
LDB3-201ENST00000263066 CALCOCO1Q9P1Z2 691 aa10.24□□□□□ -0.77
LDB3-201ENST00000263066 TBC1D2Q9BYX2 928 aa10.23□□□□□ -0.77
LDB3-201ENST00000263066 FSD2A1L4K1 749 aa10.23□□□□□ -0.77
LDB3-201ENST00000263066 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
LDB3-201ENST00000263066 TERF1P54274 439 aa10.22□□□□□ -0.77
LDB3-201ENST00000263066 LMOD3Q0VAK6 560 aa10.22□□□□□ -0.77
LDB3-201ENST00000263066 CHRNA2Q15822 529 aa10.22□□□□□ -0.77
LDB3-201ENST00000263066 C8orf34Q49A92 452 aa10.22□□□□□ -0.77
LDB3-201ENST00000263066 NUDT16Q96DE0 195 aaKnown RBP10.22□□□□□ -0.77
LDB3-201ENST00000263066 U2AF2P26368 475 aaKnown RBP eCLIP10.22□□□□□ -0.77
LDB3-201ENST00000263066 NGEFQ8N5V2 710 aa10.22□□□□□ -0.77
LDB3-201ENST00000263066 RGS22Q8NE09 1264 aa10.22□□□□□ -0.77
LDB3-201ENST00000263066 BCCIPQ9P287 314 aaKnown RBP eCLIP10.22□□□□□ -0.77
LDB3-201ENST00000263066 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.77
LDB3-201ENST00000263066 PLXNC1O60486 1568 aa10.21□□□□□ -0.77
LDB3-201ENST00000263066 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms