RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 TEFQ10587 303 aa12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 IFIT2P09913 472 aaKnown RBP12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 FILIP1Q7Z7B0 1213 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 SERPINC1P01008 464 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 ODF2Q5BJF6 829 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 RABEP1Q15276 862 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
CALCOCO1-201ENST00000262059 CNTLNQ9NXG0 1405 aa12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 TTC5Q8N0Z6 440 aa12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 VGLL3A8MV65 326 aa12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.81□□□□□ -0.36
CALCOCO1-201ENST00000262059 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 CLCN1P35523 988 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 TAX1BP1Q86VP1 789 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 IGSF3O75054 1194 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 KDM4AO75164 1064 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 MNAT1P51948 309 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 CT47A1Q5JQC4 288 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO1-201ENST00000262059 TRDNQ13061 729 aa12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 ENOX2Q16206 610 aaKnown RBP12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 MYO6Q9UM54 1294 aa12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 CWC22Q9HCG8 908 aaKnown RBP12.79□□□□□ -0.36
CALCOCO1-201ENST00000262059 SKAP1Q86WV1 359 aa12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 LMAN1P49257 510 aa12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 RNF187Q5TA31 235 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 OFD1O75665 1012 aa12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 C16orf45Q96MC5 204 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 CTDP1Q9Y5B0 961 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
CALCOCO1-201ENST00000262059 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.36
CALCOCO1-201ENST00000262059 AAMPQ13685 434 aa12.77□□□□□ -0.36
CALCOCO1-201ENST00000262059 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.36
CALCOCO1-201ENST00000262059 CCDC181Q5TID7 509 aa12.77□□□□□ -0.36
CALCOCO1-201ENST00000262059 NEFHP12036 1026 aa12.77□□□□□ -0.37
CALCOCO1-201ENST00000262059 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
CALCOCO1-201ENST00000262059 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
CALCOCO1-201ENST00000262059 KIF21BO75037 1637 aa12.77□□□□□ -0.37
CALCOCO1-201ENST00000262059 ERICH2A1L162 156 aa12.77□□□□□ -0.37
CALCOCO1-201ENST00000262059 FILIP1LQ4L180 1135 aa12.77□□□□□ -0.37
CALCOCO1-201ENST00000262059 RIPK4P57078 832 aa12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 NFXL1Q6ZNB6 911 aa12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 LRRFIP2Q9Y608 721 aaKnown RBP12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 ERC2O15083 957 aa12.76□□□□□ -0.37
CALCOCO1-201ENST00000262059 GTPBP4Q9BZE4 634 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 RUNDC1Q96C34 613 aa12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 KIF18AQ8NI77 898 aa12.75□□□□□ -0.37
CALCOCO1-201ENST00000262059 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 RAD21O60216 631 aa12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 DHX16O60231 1041 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 URI1O94763 535 aaPredicted RBP12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 MCM2P49736 904 aa12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 WDR33Q9C0J8 1336 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 USP25Q9UHP3 1055 aa12.74□□□□□ -0.37
CALCOCO1-201ENST00000262059 ANKRD62A6NC57 917 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 ERLIN2O94905 339 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 SRRTQ9BXP5 876 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 FKBP5Q13451 457 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 TRMT1Q9NXH9 659 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 GNAI1P63096 354 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 EPS15P42566 896 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 CAMK4Q16566 473 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 NUP62CLQ9H1M0 184 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 NF2P35240 595 aa12.73□□□□□ -0.37
CALCOCO1-201ENST00000262059 TMX1Q9H3N1 280 aa12.72□□□□□ -0.37
CALCOCO1-201ENST00000262059 DHX8Q14562 1220 aaKnown RBP12.72□□□□□ -0.37
CALCOCO1-201ENST00000262059 FAM107BQ9H098 131 aa12.72□□□□□ -0.37
CALCOCO1-201ENST00000262059 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
CALCOCO1-201ENST00000262059 C11orf95C9JLR9 678 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO1-201ENST00000262059 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms