RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 MCM2P49736 904 aa12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 ERLIN2O94905 339 aa12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
SLC6A4-201ENST00000261707 GRM1Q13255 1194 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 SERPINC1P01008 464 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 USP47Q96K76 1375 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 OFD1O75665 1012 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 NEK4P51957 841 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
SLC6A4-201ENST00000261707 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 TRDNQ13061 729 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 UBXN4Q92575 508 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 PSMA5P28066 241 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 EPS15P42566 896 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
SLC6A4-201ENST00000261707 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.36
SLC6A4-201ENST00000261707 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.36
SLC6A4-201ENST00000261707 CCDC181Q5TID7 509 aa12.77□□□□□ -0.36
SLC6A4-201ENST00000261707 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.37
SLC6A4-201ENST00000261707 TIGD1Q96MW7 591 aa12.77□□□□□ -0.37
SLC6A4-201ENST00000261707 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
SLC6A4-201ENST00000261707 GTF2F1P35269 517 aaKnown RBP eCLIP12.77□□□□□ -0.37
SLC6A4-201ENST00000261707 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
SLC6A4-201ENST00000261707 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 ERC2O15083 957 aa12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC6A4-201ENST00000261707 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 COG3Q96JB2 828 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 TNNT1P13805 278 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 MTMR7Q9Y216 660 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 DYNC1I1O14576 645 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 CBFA2T2O43439 604 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 PDCP20941 246 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 IQCEQ6IPM2 695 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 CARMIL1Q5VZK9 1371 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 MAGEC2Q9UBF1 373 aaPredicted RBP12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
SLC6A4-201ENST00000261707 ERICH2A1L162 156 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 NEFHP12036 1026 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 C9orf78Q9NZ63 289 aaPredicted RBP12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 SYCE3A1L190 88 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
SLC6A4-201ENST00000261707 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 ZNHIT6Q9NWK9 470 aaKnown RBP12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 GBP3Q9H0R5 595 aa12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 RIPK4P57078 832 aa12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 PTPN14Q15678 1187 aa12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 KIF2AO00139 706 aaPredicted RBP12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
SLC6A4-201ENST00000261707 G3BP1Q13283 466 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 SEPT7Q16181 437 aaKnown RBP12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 HMGB2P26583 209 aaKnown RBP12.72□□□□□ -0.37
SLC6A4-201ENST00000261707 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.37
SLC6A4-201ENST00000261707 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
SLC6A4-201ENST00000261707 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
SLC6A4-201ENST00000261707 STK38Q15208 465 aa12.71□□□□□ -0.37
SLC6A4-201ENST00000261707 CDCA7LQ96GN5 454 aa12.71□□□□□ -0.38
SLC6A4-201ENST00000261707 ANKRD62A6NC57 917 aa12.71□□□□□ -0.38
SLC6A4-201ENST00000261707 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.38
SLC6A4-201ENST00000261707 DACH1Q9UI36 760 aa12.71□□□□□ -0.38
SLC6A4-201ENST00000261707 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
SLC6A4-201ENST00000261707 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 691.7 ms