RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 NOL10Q9BSC4 688 aaKnown RBP9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 COG6Q9Y2V7 657 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 RGL3Q3MIN7 710 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 TRIM5Q9C035 493 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 CAMSAP2Q08AD1 1489 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 WDR33Q9C0J8 1336 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 PLEKHD1A6NEE1 506 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 SF3A1Q15459 793 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 RRP12Q5JTH9 1297 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 ANKRD45Q5TZF3 282 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 H3BQV1 296 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 HSP90B1P14625 803 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 IPO4Q8TEX9 1081 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 KLHL40Q2TBA0 621 aa9.98□□□□□ -0.81
SNCAIP-201ENST00000261367 PRPF40AO75400 957 aaKnown RBP9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 CCDC73Q6ZRK6 1079 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 ADGRL2O95490 1459 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 MBD5Q9P267 1494 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 PDCP20941 246 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 MICALCLQ6ZW33 695 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 CCDC91Q7Z6B0 441 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 PKD2Q13563 968 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 ERCC6L2Q5T890 1561 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 POLR3GO15318 223 aaPredicted RBP9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 AEBP1Q8IUX7 1158 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 ZKSCAN5Q9Y2L8 839 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 ANKRD30BQ9BXX2 1392 aa9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
SNCAIP-201ENST00000261367 ATP10BO94823 1461 aa9.96□□□□□ -0.81
SNCAIP-201ENST00000261367 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.81
SNCAIP-201ENST00000261367 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.81
SNCAIP-201ENST00000261367 TRIM6-TRIM34B2RNG4 842 aa9.96□□□□□ -0.82
SNCAIP-201ENST00000261367 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 KIF18AQ8NI77 898 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 IQCEQ6IPM2 695 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 RNF214Q8ND24 703 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 UBXN4Q92575 508 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 BCORL1Q5H9F3 1711 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 SHTN1A0MZ66 631 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 ERICH4A6NGS2 130 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 CAVIN2O95810 425 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 MYO6Q9UM54 1294 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 CAGE1Q8TC20 777 aa9.95□□□□□ -0.82
SNCAIP-201ENST00000261367 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 CBFA2T2O43439 604 aa9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 TUBB4BP68371 445 aa9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 NCOA1Q15788 1441 aa9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 PNISRQ8TF01 805 aaKnown RBP9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 PDZRN3Q9UPQ7 1066 aa9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 KANK1Q14678 1352 aa9.94□□□□□ -0.82
SNCAIP-201ENST00000261367 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 HSP90AB3PQ58FF7 597 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 SLC26A8Q96RN1 970 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 RASSF4Q9H2L5 321 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 CCDC171Q6TFL3 1326 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 SAMD9LQ8IVG5 1584 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 PTPN14Q15678 1187 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 MAP9Q49MG5 647 aa9.93□□□□□ -0.82
SNCAIP-201ENST00000261367 NBPF8Q3BBV2 869 aa9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 CCDC183Q5T5S1 534 aa9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 FOXD4L4Q8WXT5 416 aaPredicted RBP9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 SMARCE1Q969G3 411 aa9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 KIAA1328Q86T90 577 aa9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 RUNDC1Q96C34 613 aa9.92□□□□□ -0.82
SNCAIP-201ENST00000261367 NEFHP12036 1026 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 ZNF622Q969S3 477 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 PREX2Q70Z35 1606 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 OLFM4Q6UX06 510 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 STK31Q9BXU1 1019 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 DCAF8L1A6NGE4 600 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 PIP4K2AP48426 406 aaPredicted RBP9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 DMTNQ08495 405 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 PLPPR3Q6T4P5 718 aa9.91□□□□□ -0.82
SNCAIP-201ENST00000261367 KDM5DQ9BY66 1539 aa9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 ZSCAN12O43309 604 aa9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 BRD2P25440 801 aaKnown RBP9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 ZNF397Q8NF99 534 aaPredicted RBP9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 SRRTQ9BXP5 876 aaKnown RBP9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 PANK3Q9H999 370 aa9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 TTC37Q6PGP7 1564 aa9.9□□□□□ -0.82
SNCAIP-201ENST00000261367 GSDMDP57764 484 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms