RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 IFFO2Q5TF58 517 aa18.14■□□□□ 0.5
RFPL3-201ENST00000249007 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.49
RFPL3-201ENST00000249007 YTHDC2Q9H6S0 1430 aaKnown RBP18.13■□□□□ 0.49
RFPL3-201ENST00000249007 CEP350Q5VT06 3117 aa18.12■□□□□ 0.49
RFPL3-201ENST00000249007 CAMTA1Q9Y6Y1 1673 aa18.12■□□□□ 0.49
RFPL3-201ENST00000249007 PMFBP1Q8TBY8 1022 aa18.12■□□□□ 0.49
RFPL3-201ENST00000249007 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
RFPL3-201ENST00000249007 SPATA31A1Q5TZJ5 1347 aa18.11■□□□□ 0.49
RFPL3-201ENST00000249007 SIRT1Q96EB6 747 aa18.09■□□□□ 0.49
RFPL3-201ENST00000249007 ANKRD30BQ9BXX2 1392 aa18.09■□□□□ 0.49
RFPL3-201ENST00000249007 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
RFPL3-201ENST00000249007 ALS2Q96Q42 1657 aa18.08■□□□□ 0.49
RFPL3-201ENST00000249007 PIK3C2GO75747 1445 aa18.07■□□□□ 0.48
RFPL3-201ENST00000249007 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
RFPL3-201ENST00000249007 ANKARQ7Z5J8 1434 aa18.07■□□□□ 0.48
RFPL3-201ENST00000249007 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
RFPL3-201ENST00000249007 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
RFPL3-201ENST00000249007 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
RFPL3-201ENST00000249007 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
RFPL3-201ENST00000249007 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
RFPL3-201ENST00000249007 C1QTNF8P60827 252 aa18.05■□□□□ 0.48
RFPL3-201ENST00000249007 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
RFPL3-201ENST00000249007 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
RFPL3-201ENST00000249007 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
RFPL3-201ENST00000249007 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
RFPL3-201ENST00000249007 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
RFPL3-201ENST00000249007 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
RFPL3-201ENST00000249007 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
RFPL3-201ENST00000249007 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
RFPL3-201ENST00000249007 NRKQ7Z2Y5 1582 aa18.01■□□□□ 0.47
RFPL3-201ENST00000249007 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
RFPL3-201ENST00000249007 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
RFPL3-201ENST00000249007 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
RFPL3-201ENST00000249007 C14orf93Q9H972 538 aaKnown RBP17.98■□□□□ 0.47
RFPL3-201ENST00000249007 POGKQ9P215 609 aa17.98■□□□□ 0.47
RFPL3-201ENST00000249007 CHD4Q14839 1912 aa17.98■□□□□ 0.47
RFPL3-201ENST00000249007 EVA1CP58658 441 aa17.97■□□□□ 0.47
RFPL3-201ENST00000249007 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
RFPL3-201ENST00000249007 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
RFPL3-201ENST00000249007 CASZ1Q86V15 1759 aa17.96■□□□□ 0.47
RFPL3-201ENST00000249007 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
RFPL3-201ENST00000249007 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
RFPL3-201ENST00000249007 MYOM1P52179 1685 aa17.96■□□□□ 0.47
RFPL3-201ENST00000249007 EIF3AQ14152 1382 aaKnown RBP17.95■□□□□ 0.46
RFPL3-201ENST00000249007 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
RFPL3-201ENST00000249007 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
RFPL3-201ENST00000249007 TCP11L2Q8N4U5 519 aa17.95■□□□□ 0.46
RFPL3-201ENST00000249007 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
RFPL3-201ENST00000249007 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
RFPL3-201ENST00000249007 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
RFPL3-201ENST00000249007 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
RFPL3-201ENST00000249007 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
RFPL3-201ENST00000249007 PTGER2P43116 358 aa17.94■□□□□ 0.46
RFPL3-201ENST00000249007 RGPD3A6NKT7 1758 aaPredicted RBP17.93■□□□□ 0.46
RFPL3-201ENST00000249007 RGPD4Q7Z3J3 1758 aa17.93■□□□□ 0.46
RFPL3-201ENST00000249007 DLC1Q96QB1 1528 aa17.93■□□□□ 0.46
RFPL3-201ENST00000249007 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
RFPL3-201ENST00000249007 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
RFPL3-201ENST00000249007 TULP4Q9NRJ4 1543 aa17.92■□□□□ 0.46
RFPL3-201ENST00000249007 PLSCR1O15162 318 aa17.92■□□□□ 0.46
RFPL3-201ENST00000249007 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
RFPL3-201ENST00000249007 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
RFPL3-201ENST00000249007 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
RFPL3-201ENST00000249007 ATF5Q9Y2D1 282 aaPredicted RBP17.91■□□□□ 0.46
RFPL3-201ENST00000249007 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
RFPL3-201ENST00000249007 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
RFPL3-201ENST00000249007 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
RFPL3-201ENST00000249007 PPARGC1BQ86YN6 1023 aaKnown RBP17.9■□□□□ 0.46
RFPL3-201ENST00000249007 THRAP3Q9Y2W1 955 aaKnown RBP17.9■□□□□ 0.46
RFPL3-201ENST00000249007 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
RFPL3-201ENST00000249007 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.45
RFPL3-201ENST00000249007 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
RFPL3-201ENST00000249007 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
RFPL3-201ENST00000249007 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
RFPL3-201ENST00000249007 ATP7BP35670 1465 aa17.87■□□□□ 0.45
RFPL3-201ENST00000249007 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
RFPL3-201ENST00000249007 SBF2Q86WG5 1849 aa17.85■□□□□ 0.45
RFPL3-201ENST00000249007 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
RFPL3-201ENST00000249007 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
RFPL3-201ENST00000249007 PROM2Q8N271 834 aa17.84■□□□□ 0.45
RFPL3-201ENST00000249007 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
RFPL3-201ENST00000249007 CPDO75976 1380 aa17.83■□□□□ 0.45
RFPL3-201ENST00000249007 PTF1AQ7RTS3 328 aa17.83■□□□□ 0.45
RFPL3-201ENST00000249007 STK32BQ9NY57 414 aa17.83■□□□□ 0.45
RFPL3-201ENST00000249007 ITSN1Q15811 1721 aa17.83■□□□□ 0.44
RFPL3-201ENST00000249007 ADGRB1O14514 1584 aa17.82■□□□□ 0.44
RFPL3-201ENST00000249007 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
RFPL3-201ENST00000249007 COL5A2P05997 1499 aaPredicted RBP17.81■□□□□ 0.44
RFPL3-201ENST00000249007 DDB1Q16531 1140 aa17.81■□□□□ 0.44
RFPL3-201ENST00000249007 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
RFPL3-201ENST00000249007 SLC15A2Q16348 729 aa17.8■□□□□ 0.44
RFPL3-201ENST00000249007 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
RFPL3-201ENST00000249007 CRB1P82279 1406 aa17.8■□□□□ 0.44
RFPL3-201ENST00000249007 GPR162Q16538 588 aa17.79■□□□□ 0.44
RFPL3-201ENST00000249007 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
RFPL3-201ENST00000249007 ARXQ96QS3 562 aa17.79■□□□□ 0.44
RFPL3-201ENST00000249007 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
RFPL3-201ENST00000249007 TXNRD1Q16881 649 aa17.78■□□□□ 0.44
RFPL3-201ENST00000249007 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
RFPL3-201ENST00000249007 USP19O94966 1318 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms