RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
EXOSC9-201ENST00000243498 PTCH1Q13635 1447 aa12.48□□□□□ -0.41
EXOSC9-201ENST00000243498 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 NINLQ9Y2I6 1382 aa12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
EXOSC9-201ENST00000243498 KCNA6P17658 529 aa12.46□□□□□ -0.41
EXOSC9-201ENST00000243498 WAPLQ7Z5K2 1190 aa12.46□□□□□ -0.41
EXOSC9-201ENST00000243498 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.42
EXOSC9-201ENST00000243498 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.42
EXOSC9-201ENST00000243498 PTPRUQ92729 1446 aa12.44□□□□□ -0.42
EXOSC9-201ENST00000243498 ROBO2Q9HCK4 1378 aa12.44□□□□□ -0.42
EXOSC9-201ENST00000243498 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
EXOSC9-201ENST00000243498 HSPA2P54652 639 aa12.44□□□□□ -0.42
EXOSC9-201ENST00000243498 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
EXOSC9-201ENST00000243498 CDK19Q9BWU1 502 aa12.44□□□□□ -0.42
EXOSC9-201ENST00000243498 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
EXOSC9-201ENST00000243498 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
EXOSC9-201ENST00000243498 GSE1Q14687 1217 aa12.43□□□□□ -0.42
EXOSC9-201ENST00000243498 PANK3Q9H999 370 aa12.43□□□□□ -0.42
EXOSC9-201ENST00000243498 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
EXOSC9-201ENST00000243498 PLEKHH1Q9ULM0 1364 aa12.42□□□□□ -0.42
EXOSC9-201ENST00000243498 CABP2Q9NPB3 220 aa12.42□□□□□ -0.42
EXOSC9-201ENST00000243498 ADGRB2O60241 1585 aa12.42□□□□□ -0.42
EXOSC9-201ENST00000243498 PYGBP11216 843 aa12.41□□□□□ -0.42
EXOSC9-201ENST00000243498 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
EXOSC9-201ENST00000243498 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
EXOSC9-201ENST00000243498 NWD1Q149M9 1564 aa12.41□□□□□ -0.42
EXOSC9-201ENST00000243498 IER5LQ5T953 404 aa12.4□□□□□ -0.42
EXOSC9-201ENST00000243498 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
EXOSC9-201ENST00000243498 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.42
EXOSC9-201ENST00000243498 MYOM1P52179 1685 aa12.4□□□□□ -0.42
EXOSC9-201ENST00000243498 CCER2I3L3R5 266 aa12.4□□□□□ -0.43
EXOSC9-201ENST00000243498 SEC24BO95487 1268 aa12.4□□□□□ -0.43
EXOSC9-201ENST00000243498 RALBP1Q15311 655 aa12.4□□□□□ -0.43
EXOSC9-201ENST00000243498 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.43
EXOSC9-201ENST00000243498 STRCQ7RTU9 1775 aa12.39□□□□□ -0.43
EXOSC9-201ENST00000243498 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.39□□□□□ -0.43
EXOSC9-201ENST00000243498 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
EXOSC9-201ENST00000243498 NCOA3Q9Y6Q9 1424 aa12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 PRKRIP1Q9H875 184 aaPredicted RBP12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
EXOSC9-201ENST00000243498 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
EXOSC9-201ENST00000243498 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
EXOSC9-201ENST00000243498 NPC1L1Q9UHC9 1359 aa12.37□□□□□ -0.43
EXOSC9-201ENST00000243498 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
EXOSC9-201ENST00000243498 ATP7BP35670 1465 aa12.36□□□□□ -0.43
EXOSC9-201ENST00000243498 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
EXOSC9-201ENST00000243498 ANKARQ7Z5J8 1434 aa12.35□□□□□ -0.43
EXOSC9-201ENST00000243498 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
EXOSC9-201ENST00000243498 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
EXOSC9-201ENST00000243498 ADGRL3Q9HAR2 1447 aa12.34□□□□□ -0.43
EXOSC9-201ENST00000243498 CABP1Q9NZU7 370 aa12.34□□□□□ -0.43
EXOSC9-201ENST00000243498 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
EXOSC9-201ENST00000243498 NSD2O96028 1365 aa12.34□□□□□ -0.43
EXOSC9-201ENST00000243498 FMN2Q9NZ56 1722 aa12.33□□□□□ -0.44
EXOSC9-201ENST00000243498 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
EXOSC9-201ENST00000243498 C19orf44Q9H6X5 657 aa12.33□□□□□ -0.44
EXOSC9-201ENST00000243498 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
EXOSC9-201ENST00000243498 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
EXOSC9-201ENST00000243498 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
EXOSC9-201ENST00000243498 NALCNQ8IZF0 1738 aa12.32□□□□□ -0.44
EXOSC9-201ENST00000243498 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
EXOSC9-201ENST00000243498 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
EXOSC9-201ENST00000243498 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
EXOSC9-201ENST00000243498 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-201ENST00000243498 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-201ENST00000243498 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
EXOSC9-201ENST00000243498 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 ATF3P18847 181 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 TOPAZ1Q8N9V7 1692 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 DCCP43146 1447 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 MSH6P52701 1360 aa12.3□□□□□ -0.44
EXOSC9-201ENST00000243498 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-201ENST00000243498 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
EXOSC9-201ENST00000243498 CPSF1Q10570 1443 aaKnown RBP12.29□□□□□ -0.44
EXOSC9-201ENST00000243498 STRCP1A6NGW2 1772 aa12.29□□□□□ -0.44
EXOSC9-201ENST00000243498 TMEM94Q12767 1356 aa12.29□□□□□ -0.44
EXOSC9-201ENST00000243498 PRR36Q9H6K5 1346 aa12.29□□□□□ -0.44
EXOSC9-201ENST00000243498 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
EXOSC9-201ENST00000243498 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
EXOSC9-201ENST00000243498 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
EXOSC9-201ENST00000243498 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
EXOSC9-201ENST00000243498 BRD4O60885 1362 aaPredicted RBP12.28□□□□□ -0.44
EXOSC9-201ENST00000243498 MORC1Q86VD1 984 aa12.27□□□□□ -0.44
EXOSC9-201ENST00000243498 MRS2Q9HD23 443 aa12.27□□□□□ -0.44
EXOSC9-201ENST00000243498 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.44
EXOSC9-201ENST00000243498 MON2Q7Z3U7 1717 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms