RNA–Protein interactions for RNA: ENST00000227474.7

PUS3-201, Transcript of pseudouridylate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUS3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-201ENST00000227474 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
PUS3-201ENST00000227474 RAPGEF3O95398 923 aa11.34□□□□□ -0.59
PUS3-201ENST00000227474 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
PUS3-201ENST00000227474 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
PUS3-201ENST00000227474 RICTORQ6R327 1708 aa11.33□□□□□ -0.59
PUS3-201ENST00000227474 MYOM1P52179 1685 aa11.33□□□□□ -0.6
PUS3-201ENST00000227474 PIK3C2BO00750 1634 aa11.33□□□□□ -0.6
PUS3-201ENST00000227474 ASXL1Q8IXJ9 1541 aa11.33□□□□□ -0.6
PUS3-201ENST00000227474 CAMSAP1Q5T5Y3 1602 aa11.32□□□□□ -0.6
PUS3-201ENST00000227474 GGT6Q6P531 493 aa11.32□□□□□ -0.6
PUS3-201ENST00000227474 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
PUS3-201ENST00000227474 C14orf93Q9H972 538 aaKnown RBP11.32□□□□□ -0.6
PUS3-201ENST00000227474 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
PUS3-201ENST00000227474 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
PUS3-201ENST00000227474 KNSTRNQ9Y448 316 aa11.32□□□□□ -0.6
PUS3-201ENST00000227474 PPLO60437 1756 aa11.31□□□□□ -0.6
PUS3-201ENST00000227474 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
PUS3-201ENST00000227474 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
PUS3-201ENST00000227474 KDM5AP29375 1690 aaKnown RBP11.31□□□□□ -0.6
PUS3-201ENST00000227474 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
PUS3-201ENST00000227474 YEATS2Q9ULM3 1422 aa11.3□□□□□ -0.6
PUS3-201ENST00000227474 SIGLEC1Q9BZZ2 1709 aa11.29□□□□□ -0.6
PUS3-201ENST00000227474 RETREG2Q8NC44 543 aa11.29□□□□□ -0.6
PUS3-201ENST00000227474 ZFYVE9O95405 1425 aa11.28□□□□□ -0.6
PUS3-201ENST00000227474 CENPJQ9HC77 1338 aaPredicted RBP11.28□□□□□ -0.6
PUS3-201ENST00000227474 NEXMIFQ5QGS0 1516 aa11.28□□□□□ -0.6
PUS3-201ENST00000227474 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
PUS3-201ENST00000227474 SPTY2D1Q68D10 685 aaPredicted RBP11.28□□□□□ -0.6
PUS3-201ENST00000227474 ANKRD13AQ8IZ07 590 aa11.28□□□□□ -0.6
PUS3-201ENST00000227474 BARGINQ6ZT62 677 aa11.27□□□□□ -0.61
PUS3-201ENST00000227474 SPATA32Q96LK8 384 aa11.27□□□□□ -0.61
PUS3-201ENST00000227474 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
PUS3-201ENST00000227474 IGSF5Q9NSI5 407 aa11.27□□□□□ -0.61
PUS3-201ENST00000227474 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
PUS3-201ENST00000227474 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
PUS3-201ENST00000227474 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
PUS3-201ENST00000227474 REREQ9P2R6 1566 aa11.26□□□□□ -0.61
PUS3-201ENST00000227474 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
PUS3-201ENST00000227474 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
PUS3-201ENST00000227474 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
PUS3-201ENST00000227474 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
PUS3-201ENST00000227474 FAM193AP78312 1265 aa11.25□□□□□ -0.61
PUS3-201ENST00000227474 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
PUS3-201ENST00000227474 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
PUS3-201ENST00000227474 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
PUS3-201ENST00000227474 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
PUS3-201ENST00000227474 DIP2BQ9P265 1576 aa11.25□□□□□ -0.61
PUS3-201ENST00000227474 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
PUS3-201ENST00000227474 CANXP27824 592 aaKnown RBP11.25□□□□□ -0.61
PUS3-201ENST00000227474 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
PUS3-201ENST00000227474 MARCH6O60337 910 aa11.24□□□□□ -0.61
PUS3-201ENST00000227474 IDI1Q13907 227 aa11.24□□□□□ -0.61
PUS3-201ENST00000227474 AGLP35573 1532 aa11.24□□□□□ -0.61
PUS3-201ENST00000227474 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
PUS3-201ENST00000227474 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
PUS3-201ENST00000227474 B4GALNT3Q6L9W6 998 aa11.23□□□□□ -0.61
PUS3-201ENST00000227474 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
PUS3-201ENST00000227474 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
PUS3-201ENST00000227474 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
PUS3-201ENST00000227474 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
PUS3-201ENST00000227474 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
PUS3-201ENST00000227474 TRAK2O60296 914 aa11.21□□□□□ -0.61
PUS3-201ENST00000227474 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
PUS3-201ENST00000227474 PREX1Q8TCU6 1659 aa11.21□□□□□ -0.61
PUS3-201ENST00000227474 TMEM131LA2VDJ0 1609 aa11.21□□□□□ -0.61
PUS3-201ENST00000227474 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.62
PUS3-201ENST00000227474 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.62
PUS3-201ENST00000227474 CLUAP1Q96AJ1 413 aa11.2□□□□□ -0.62
PUS3-201ENST00000227474 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
PUS3-201ENST00000227474 AMOTL2Q9Y2J4 779 aa11.2□□□□□ -0.62
PUS3-201ENST00000227474 PPME1Q9Y570 386 aa11.2□□□□□ -0.62
PUS3-201ENST00000227474 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
PUS3-201ENST00000227474 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
PUS3-201ENST00000227474 PLEKHH1Q9ULM0 1364 aa11.19□□□□□ -0.62
PUS3-201ENST00000227474 TPD52L2O43399 206 aaKnown RBP11.19□□□□□ -0.62
PUS3-201ENST00000227474 TULP4Q9NRJ4 1543 aa11.19□□□□□ -0.62
PUS3-201ENST00000227474 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
PUS3-201ENST00000227474 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
PUS3-201ENST00000227474 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
PUS3-201ENST00000227474 SUGT1Q9Y2Z0 365 aa11.18□□□□□ -0.62
PUS3-201ENST00000227474 EVC2Q86UK5 1308 aa11.17□□□□□ -0.62
PUS3-201ENST00000227474 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
PUS3-201ENST00000227474 NGEFQ8N5V2 710 aa11.17□□□□□ -0.62
PUS3-201ENST00000227474 FANCIQ9NVI1 1328 aa11.17□□□□□ -0.62
PUS3-201ENST00000227474 PHF14O94880 888 aa11.16□□□□□ -0.62
PUS3-201ENST00000227474 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
PUS3-201ENST00000227474 TRMT2AQ8IZ69 625 aaKnown RBP11.16□□□□□ -0.62
PUS3-201ENST00000227474 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
PUS3-201ENST00000227474 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
PUS3-201ENST00000227474 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
PUS3-201ENST00000227474 SIRT1Q96EB6 747 aa11.16□□□□□ -0.62
PUS3-201ENST00000227474 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
PUS3-201ENST00000227474 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
PUS3-201ENST00000227474 PTPRMP28827 1452 aa11.15□□□□□ -0.62
PUS3-201ENST00000227474 SPATA31D1Q6ZQQ2 1576 aa11.15□□□□□ -0.62
PUS3-201ENST00000227474 NME8Q8N427 588 aa11.15□□□□□ -0.62
PUS3-201ENST00000227474 NSD2O96028 1365 aa11.15□□□□□ -0.62
PUS3-201ENST00000227474 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
PUS3-201ENST00000227474 FBXO31Q5XUX0 539 aaPredicted RBP11.14□□□□□ -0.63
PUS3-201ENST00000227474 EXOC6Q8TAG9 804 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms