RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 TRPM3Q9HCF6 1732 aaPredicted RBP31.3■■■□□ 2.6
USF2-201ENST00000222305 FYB1O15117 783 aa31.3■■■□□ 2.6
USF2-201ENST00000222305 BRINP3Q76B58 766 aa31.3■■■□□ 2.6
USF2-201ENST00000222305 GGNBP2Q9H3C7 697 aa31.3■■■□□ 2.6
USF2-201ENST00000222305 PIK3C2AO00443 1686 aa31.3■■■□□ 2.6
USF2-201ENST00000222305 IQSEC2Q5JU85 1478 aa31.29■■■□□ 2.6
USF2-201ENST00000222305 PSME1Q06323 249 aa31.28■■■□□ 2.6
USF2-201ENST00000222305 RALBP1Q15311 655 aa31.28■■■□□ 2.6
USF2-201ENST00000222305 NME9Q86XW9 330 aa31.28■■■□□ 2.6
USF2-201ENST00000222305 XPCQ01831 940 aaPredicted RBP31.27■■■□□ 2.6
USF2-201ENST00000222305 DDX17Q92841 729 aaKnown RBP31.27■■■□□ 2.6
USF2-201ENST00000222305 ROBO1Q9Y6N7 1651 aa31.27■■■□□ 2.6
USF2-201ENST00000222305 UBAP1LF5GYI3 381 aa31.24■■■□□ 2.59
USF2-201ENST00000222305 ZRANB1Q9UGI0 708 aa31.24■■■□□ 2.59
USF2-201ENST00000222305 NHSL1Q5SYE7 1610 aa31.24■■■□□ 2.59
USF2-201ENST00000222305 MARF1Q9Y4F3 1742 aaKnown RBP31.24■■■□□ 2.59
USF2-201ENST00000222305 TTC21AQ8NDW8 1320 aa31.23■■■□□ 2.59
USF2-201ENST00000222305 TOM1O60784 492 aa31.23■■■□□ 2.59
USF2-201ENST00000222305 PAK3O75914 559 aaPredicted RBP31.23■■■□□ 2.59
USF2-201ENST00000222305 MORC1Q86VD1 984 aa31.23■■■□□ 2.59
USF2-201ENST00000222305 BRD4O60885 1362 aaPredicted RBP31.21■■■□□ 2.59
USF2-201ENST00000222305 PIP4K2BP78356 416 aa31.21■■■□□ 2.59
USF2-201ENST00000222305 KRT28Q7Z3Y7 464 aa31.21■■■□□ 2.59
USF2-201ENST00000222305 NPHP3Q7Z494 1330 aa31.2■■■□□ 2.59
USF2-201ENST00000222305 MYBBP1AQ9BQG0 1328 aaKnown RBP31.2■■■□□ 2.59
USF2-201ENST00000222305 PXDNQ92626 1479 aa31.2■■■□□ 2.58
USF2-201ENST00000222305 USP54Q70EL1 1684 aa31.19■■■□□ 2.58
USF2-201ENST00000222305 ALS2Q96Q42 1657 aa31.19■■■□□ 2.58
USF2-201ENST00000222305 SCAF1Q9H7N4 1312 aaKnown RBP31.19■■■□□ 2.58
USF2-201ENST00000222305 TNNT2P45379 298 aaPredicted RBP31.19■■■□□ 2.58
USF2-201ENST00000222305 OVOS2A0A0J9YW53 1432 aa31.17■■■□□ 2.58
USF2-201ENST00000222305 OVOS2Q6IE36 1432 aa31.17■■■□□ 2.58
USF2-201ENST00000222305 MAP2P11137 1827 aaKnown RBP31.16■■■□□ 2.58
USF2-201ENST00000222305 COG3Q96JB2 828 aa31.16■■■□□ 2.58
USF2-201ENST00000222305 CCER2I3L3R5 266 aa31.15■■■□□ 2.58
USF2-201ENST00000222305 PPP2R1AP30153 589 aa31.15■■■□□ 2.58
USF2-201ENST00000222305 ABTB2Q8N961 1025 aa31.15■■■□□ 2.58
USF2-201ENST00000222305 CCDC184Q52MB2 194 aa31.14■■■□□ 2.58
USF2-201ENST00000222305 NUTM2GQ5VZR2 741 aa31.14■■■□□ 2.58
USF2-201ENST00000222305 USP31Q70CQ4 1352 aa31.12■■■□□ 2.57
USF2-201ENST00000222305 NLRP6P59044 892 aa31.1■■■□□ 2.57
USF2-201ENST00000222305 SBNO1A3KN83 1393 aa31.1■■■□□ 2.57
USF2-201ENST00000222305 NLRP13Q86W25 1043 aa31.09■■■□□ 2.57
USF2-201ENST00000222305 LMOD2Q6P5Q4 547 aa31.09■■■□□ 2.57
USF2-201ENST00000222305 TNS3Q68CZ2 1445 aa31.09■■■□□ 2.57
USF2-201ENST00000222305 AHDC1Q5TGY3 1603 aaPredicted RBP31.08■■■□□ 2.57
USF2-201ENST00000222305 SOS2Q07890 1332 aaPredicted RBP31.08■■■□□ 2.57
USF2-201ENST00000222305 FBLN1P23142 703 aa31.07■■■□□ 2.56
USF2-201ENST00000222305 MRS2Q9HD23 443 aa31.06■■■□□ 2.56
USF2-201ENST00000222305 PHLPP1O60346 1717 aa31.06■■■□□ 2.56
USF2-201ENST00000222305 SPATA31A3Q5VYP0 1347 aa31.03■■■□□ 2.56
USF2-201ENST00000222305 SOX12O15370 315 aa31.02■■■□□ 2.56
USF2-201ENST00000222305 CRYBG1Q9Y4K1 1723 aa31.02■■■□□ 2.56
USF2-201ENST00000222305 LTN1O94822 1766 aa31.01■■■□□ 2.55
USF2-201ENST00000222305 PHRF1Q9P1Y6 1649 aaKnown RBP31.01■■■□□ 2.55
USF2-201ENST00000222305 PLEKHG5O94827 1062 aa31.01■■■□□ 2.55
USF2-201ENST00000222305 MED1Q15648 1581 aaPredicted RBP31■■■□□ 2.55
USF2-201ENST00000222305 SLIT3O75094 1523 aa31■■■□□ 2.55
USF2-201ENST00000222305 AATKQ6ZMQ8 1374 aa30.99■■■□□ 2.55
USF2-201ENST00000222305 MTHFSP49914 203 aa30.99■■■□□ 2.55
USF2-201ENST00000222305 COL16A1Q07092 1604 aaPredicted RBP30.98■■■□□ 2.55
USF2-201ENST00000222305 ARHGEF10O15013 1369 aa30.97■■■□□ 2.55
USF2-201ENST00000222305 RRS1Q15050 365 aaKnown RBP30.97■■■□□ 2.55
USF2-201ENST00000222305 NFAT5O94916 1531 aa30.96■■■□□ 2.55
USF2-201ENST00000222305 PEAK1Q9H792 1746 aa30.96■■■□□ 2.55
USF2-201ENST00000222305 POLKQ9UBT6 870 aa30.96■■■□□ 2.55
USF2-201ENST00000222305 ABCA3Q99758 1704 aa30.96■■■□□ 2.55
USF2-201ENST00000222305 USP19O94966 1318 aa30.96■■■□□ 2.55
USF2-201ENST00000222305 EMILIN1Q9Y6C2 1016 aa30.95■■■□□ 2.55
USF2-201ENST00000222305 SMG6Q86US8 1419 aaKnown RBP30.95■■■□□ 2.54
USF2-201ENST00000222305 SHPRHQ149N8 1683 aa30.93■■■□□ 2.54
USF2-201ENST00000222305 PPM1GO15355 546 aaPredicted RBP30.92■■■□□ 2.54
USF2-201ENST00000222305 CABLES1Q8TDN4 633 aa30.9■■■□□ 2.54
USF2-201ENST00000222305 CDK12Q9NYV4 1490 aaPredicted RBP30.89■■■□□ 2.54
USF2-201ENST00000222305 COL3A1P02461 1466 aaPredicted RBP30.89■■■□□ 2.53
USF2-201ENST00000222305 GCP02774 474 aa30.88■■■□□ 2.53
USF2-201ENST00000222305 KCNH5Q8NCM2 988 aa30.88■■■□□ 2.53
USF2-201ENST00000222305 MAP3K19Q56UN5 1328 aa30.88■■■□□ 2.53
USF2-201ENST00000222305 LRRC59Q96AG4 307 aaKnown RBP30.87■■■□□ 2.53
USF2-201ENST00000222305 FAM9BQ8IZU0 186 aa30.87■■■□□ 2.53
USF2-201ENST00000222305 PNISRQ8TF01 805 aaKnown RBP30.87■■■□□ 2.53
USF2-201ENST00000222305 CFAP53Q96M91 514 aa30.87■■■□□ 2.53
USF2-201ENST00000222305 COL22A1Q8NFW1 1626 aaPredicted RBP30.86■■■□□ 2.53
USF2-201ENST00000222305 PNPLA6Q8IY17 1366 aa30.84■■■□□ 2.53
USF2-201ENST00000222305 RGPD5Q99666 1765 aa30.82■■■□□ 2.52
USF2-201ENST00000222305 HSPA1LP34931 641 aa30.82■■■□□ 2.52
USF2-201ENST00000222305 ZBTB7CA1YPR0 619 aa30.81■■■□□ 2.52
USF2-201ENST00000222305 INSRP06213 1382 aa30.8■■■□□ 2.52
USF2-201ENST00000222305 FLT4P35916 1363 aa30.8■■■□□ 2.52
USF2-201ENST00000222305 AMPHP49418 695 aa30.8■■■□□ 2.52
USF2-201ENST00000222305 ZC3H6P61129 1189 aaKnown RBP30.79■■■□□ 2.52
USF2-201ENST00000222305 ARHGEF25Q86VW2 580 aa30.78■■■□□ 2.52
USF2-201ENST00000222305 HSP90AB2PQ58FF8 381 aa30.77■■■□□ 2.52
USF2-201ENST00000222305 WDR43Q15061 677 aaKnown RBP eCLIP30.76■■■□□ 2.52
USF2-201ENST00000222305 RTL1A6NKG5 1358 aa30.76■■■□□ 2.51
USF2-201ENST00000222305 KIF24Q5T7B8 1368 aa30.76■■■□□ 2.51
USF2-201ENST00000222305 DIAPH1O60610 1272 aaKnown RBP30.76■■■□□ 2.51
USF2-201ENST00000222305 HOXC9P31274 260 aa30.76■■■□□ 2.51
USF2-201ENST00000222305 HAP1P54257 671 aaPredicted RBP30.76■■■□□ 2.51
USF2-201ENST00000222305 COL18A1P39060 1754 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms