RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 INTS3Q68E01 1043 aaKnown RBP10.59□□□□□ -0.71
SUPT16H-201ENST00000216297 TESK2Q96S53 571 aa10.59□□□□□ -0.71
SUPT16H-201ENST00000216297 GOLGA6L4A6NEF3 574 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 HNRNPMP52272 730 aaKnown RBP eCLIP10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 INSRP06213 1382 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 KDM5CP41229 1560 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 CHGAP10645 457 aaKnown RBP10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 NLRP1Q9C000 1473 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 THOC2Q8NI27 1593 aaKnown RBP10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 SSH1Q8WYL5 1049 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
SUPT16H-201ENST00000216297 REC8O95072 547 aa10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 KRT222Q8N1A0 295 aa10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 PLEKHD1A6NEE1 506 aa10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 NUCB1Q02818 461 aa10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 HTATSF1O43719 755 aaKnown RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 TPM3P06753 285 aa10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 GTF2F1P35269 517 aaKnown RBP eCLIP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 V9GYY5 206 aaPredicted RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 TNNT1P13805 278 aa10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
SUPT16H-201ENST00000216297 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
SUPT16H-201ENST00000216297 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
SUPT16H-201ENST00000216297 FIBPO43427 364 aa10.56□□□□□ -0.72
SUPT16H-201ENST00000216297 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
SUPT16H-201ENST00000216297 ZBTB9Q96C00 473 aa10.56□□□□□ -0.72
SUPT16H-201ENST00000216297 FBLN2P98095 1184 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 GCC1Q96CN9 775 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 TRIM5Q9C035 493 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 CDK13Q14004 1512 aaKnown RBP10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 DDIT3P35638 169 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 MTHFSP49914 203 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 KIF14Q15058 1648 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 PZPP20742 1482 aa10.55□□□□□ -0.72
SUPT16H-201ENST00000216297 TSPYL1Q9H0U9 437 aa10.54□□□□□ -0.72
SUPT16H-201ENST00000216297 ZMYM3Q14202 1370 aa10.54□□□□□ -0.72
SUPT16H-201ENST00000216297 UVSSAQ2YD98 709 aa10.54□□□□□ -0.72
SUPT16H-201ENST00000216297 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
SUPT16H-201ENST00000216297 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
SUPT16H-201ENST00000216297 FKBP5Q13451 457 aaPredicted RBP10.54□□□□□ -0.72
SUPT16H-201ENST00000216297 UHRF1BP1Q6BDS2 1440 aa10.53□□□□□ -0.72
SUPT16H-201ENST00000216297 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-201ENST00000216297 KIF21AQ7Z4S6 1674 aa10.53□□□□□ -0.72
SUPT16H-201ENST00000216297 NOL10Q9BSC4 688 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-201ENST00000216297 TMX1Q9H3N1 280 aa10.53□□□□□ -0.72
SUPT16H-201ENST00000216297 GCC2Q8IWJ2 1684 aa10.53□□□□□ -0.72
SUPT16H-201ENST00000216297 POLR3GO15318 223 aaPredicted RBP10.52□□□□□ -0.72
SUPT16H-201ENST00000216297 CCDC183Q5T5S1 534 aa10.52□□□□□ -0.72
SUPT16H-201ENST00000216297 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.72
SUPT16H-201ENST00000216297 CAMSAP2Q08AD1 1489 aa10.52□□□□□ -0.72
SUPT16H-201ENST00000216297 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
SUPT16H-201ENST00000216297 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.73
SUPT16H-201ENST00000216297 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 GPS2Q13227 327 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 USP48Q86UV5 1035 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 GOLGA6L1Q8N7Z2 621 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 PYCARDQ9ULZ3 195 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 POLR1AO95602 1720 aaPredicted RBP10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 PTGS1P23219 599 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 KDM4AO75164 1064 aa10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 GADD45BO75293 160 aaPredicted RBP10.51□□□□□ -0.73
SUPT16H-201ENST00000216297 KIF2CQ99661 725 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 CCDC186Q7Z3E2 898 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 CCDC192P0DO97 292 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 NAA30Q147X3 362 aaPredicted RBP10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 TMX3Q96JJ7 454 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 ZBTB40Q9NUA8 1239 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 ATP6V1DQ9Y5K8 247 aa10.5□□□□□ -0.73
SUPT16H-201ENST00000216297 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 UPF3BQ9BZI7 483 aaKnown RBP10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 COL17A1Q9UMD9 1497 aaPredicted RBP10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 GOLGA6L19H0YKK7 550 aa10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 TERF2Q15554 542 aa10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 GPATCH11Q8N954 259 aa10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 GTF3C6Q969F1 213 aa10.49□□□□□ -0.73
SUPT16H-201ENST00000216297 SMTNL1A8MU46 457 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 ERC2O15083 957 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 GTF2A1P52655 376 aaPredicted RBP10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 C10orf67Q8IYJ2 551 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 NCOA3Q9Y6Q9 1424 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 NRDCO43847 1150 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 SMARCA5O60264 1052 aaPredicted RBP10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 CAMK4Q16566 473 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 CLEC17AQ6ZS10 378 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 TRMT1Q9NXH9 659 aaKnown RBP10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms