RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
CLDN18-201ENST00000183605 IGSF3O75054 1194 aa12.34□□□□□ -0.43
CLDN18-201ENST00000183605 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
CLDN18-201ENST00000183605 MCM5P33992 734 aa12.34□□□□□ -0.43
CLDN18-201ENST00000183605 CDC45O75419 566 aa12.33□□□□□ -0.43
CLDN18-201ENST00000183605 WDR7Q9Y4E6 1490 aa12.33□□□□□ -0.44
CLDN18-201ENST00000183605 CD2BP2O95400 341 aaKnown RBP12.33□□□□□ -0.44
CLDN18-201ENST00000183605 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
CLDN18-201ENST00000183605 CHMP4BQ9H444 224 aaKnown RBP12.33□□□□□ -0.44
CLDN18-201ENST00000183605 RABEP1Q15276 862 aa12.33□□□□□ -0.44
CLDN18-201ENST00000183605 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
CLDN18-201ENST00000183605 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
CLDN18-201ENST00000183605 FGD1P98174 961 aa12.32□□□□□ -0.44
CLDN18-201ENST00000183605 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
CLDN18-201ENST00000183605 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
CLDN18-201ENST00000183605 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
CLDN18-201ENST00000183605 NLRP1Q9C000 1473 aa12.32□□□□□ -0.44
CLDN18-201ENST00000183605 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
CLDN18-201ENST00000183605 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
CLDN18-201ENST00000183605 ZNF445P59923 1031 aa12.32□□□□□ -0.44
CLDN18-201ENST00000183605 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
CLDN18-201ENST00000183605 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
CLDN18-201ENST00000183605 JPH4Q96JJ6 628 aa12.31□□□□□ -0.44
CLDN18-201ENST00000183605 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
CLDN18-201ENST00000183605 PHF14O94880 888 aa12.3□□□□□ -0.44
CLDN18-201ENST00000183605 MBD3O95983 291 aa12.3□□□□□ -0.44
CLDN18-201ENST00000183605 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
CLDN18-201ENST00000183605 MAGI2Q86UL8 1455 aa12.3□□□□□ -0.44
CLDN18-201ENST00000183605 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
CLDN18-201ENST00000183605 NUCB1Q02818 461 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 DMTNQ08495 405 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 LRSAM1Q6UWE0 723 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
CLDN18-201ENST00000183605 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
CLDN18-201ENST00000183605 ZMYM3Q14202 1370 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CLDN18-201ENST00000183605 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLDN18-201ENST00000183605 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
CLDN18-201ENST00000183605 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
CLDN18-201ENST00000183605 LMBRD1Q9NUN5 540 aa12.28□□□□□ -0.44
CLDN18-201ENST00000183605 CFAP70Q5T0N1 1121 aa12.27□□□□□ -0.44
CLDN18-201ENST00000183605 DRC7Q8IY82 874 aa12.27□□□□□ -0.44
CLDN18-201ENST00000183605 DIAPH3Q9NSV4 1193 aa12.27□□□□□ -0.44
CLDN18-201ENST00000183605 TRAK1Q9UPV9 953 aa12.27□□□□□ -0.44
CLDN18-201ENST00000183605 PKP1Q13835 747 aa12.27□□□□□ -0.45
CLDN18-201ENST00000183605 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.45
CLDN18-201ENST00000183605 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
CLDN18-201ENST00000183605 SLC12A5Q9H2X9 1139 aa12.27□□□□□ -0.45
CLDN18-201ENST00000183605 TTC12Q9H892 705 aaPredicted RBP12.27□□□□□ -0.45
CLDN18-201ENST00000183605 USP25Q9UHP3 1055 aa12.27□□□□□ -0.45
CLDN18-201ENST00000183605 ADAMTSL3P82987 1691 aa12.27□□□□□ -0.45
CLDN18-201ENST00000183605 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLDN18-201ENST00000183605 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.45
CLDN18-201ENST00000183605 ASXL2Q76L83 1435 aa12.26□□□□□ -0.45
CLDN18-201ENST00000183605 INTS3Q68E01 1043 aaKnown RBP12.26□□□□□ -0.45
CLDN18-201ENST00000183605 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
CLDN18-201ENST00000183605 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
CLDN18-201ENST00000183605 PRIMPOLQ96LW4 560 aa12.26□□□□□ -0.45
CLDN18-201ENST00000183605 NEO1Q92859 1461 aa12.26□□□□□ -0.45
CLDN18-201ENST00000183605 ZGPATQ8N5A5 531 aaKnown RBP12.26□□□□□ -0.45
CLDN18-201ENST00000183605 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
CLDN18-201ENST00000183605 LETM1O95202 739 aaPredicted RBP12.25□□□□□ -0.45
CLDN18-201ENST00000183605 NEK4P51957 841 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLDN18-201ENST00000183605 TMEM63CQ9P1W3 806 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 PTPRGP23470 1445 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 UTP14CQ5TAP6 766 aaKnown RBP12.25□□□□□ -0.45
CLDN18-201ENST00000183605 MYO5CQ9NQX4 1742 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 A2MP01023 1474 aa12.25□□□□□ -0.45
CLDN18-201ENST00000183605 SPC24Q8NBT2 197 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 REC8O95072 547 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 KIF20AO95235 890 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
CLDN18-201ENST00000183605 DDIT3P35638 169 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 GDPD2Q9HCC8 539 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 ZBTB40Q9NUA8 1239 aa12.24□□□□□ -0.45
CLDN18-201ENST00000183605 IBTKQ9P2D0 1353 aaPredicted RBP12.24□□□□□ -0.45
CLDN18-201ENST00000183605 ARHGEF40Q8TER5 1519 aa12.23□□□□□ -0.45
CLDN18-201ENST00000183605 MCCP23508 829 aa12.23□□□□□ -0.45
CLDN18-201ENST00000183605 GPT2Q8TD30 523 aa12.23□□□□□ -0.45
CLDN18-201ENST00000183605 PDLIM2Q96JY6 352 aa12.23□□□□□ -0.45
CLDN18-201ENST00000183605 GOLGA6L6A8MZA4 724 aa12.23□□□□□ -0.45
CLDN18-201ENST00000183605 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
CLDN18-201ENST00000183605 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
CLDN18-201ENST00000183605 ZSCAN20P17040 1043 aaPredicted RBP12.22□□□□□ -0.45
CLDN18-201ENST00000183605 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
CLDN18-201ENST00000183605 ADCY5O95622 1261 aa12.21□□□□□ -0.45
CLDN18-201ENST00000183605 ZNF592Q92610 1267 aa12.21□□□□□ -0.45
CLDN18-201ENST00000183605 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLDN18-201ENST00000183605 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.46
CLDN18-201ENST00000183605 ATP10BO94823 1461 aa12.21□□□□□ -0.46
CLDN18-201ENST00000183605 TMPOP42166 694 aaKnown RBP12.2□□□□□ -0.46
CLDN18-201ENST00000183605 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
CLDN18-201ENST00000183605 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
CLDN18-201ENST00000183605 KIF2CQ99661 725 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms