RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Pola1P33609 1465 aa15.12■□□□□ 0.01
Herc4-208ENSMUST00000219577 Lrrc7Q80TE7 1490 aa15.12■□□□□ 0.01
Herc4-208ENSMUST00000219577 MyclP10166 368 aa15.12■□□□□ 0.01
Herc4-208ENSMUST00000219577 Atl3Q91YH5 541 aa15.11■□□□□ 0.01
Herc4-208ENSMUST00000219577 Stk31Q99MW1 1018 aa15.11■□□□□ 0.01
Herc4-208ENSMUST00000219577 Znf518aB2RRF6 1478 aaKnown RBP15.1■□□□□ 0.01
Herc4-208ENSMUST00000219577 NhsB1AV60 1647 aa15.1■□□□□ 0.01
Herc4-208ENSMUST00000219577 Smarca5Q91ZW3 1051 aaKnown RBP15.1■□□□□ 0.01
Herc4-208ENSMUST00000219577 Abca6Q8K441 1624 aa15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 PalldQ9ET54 1408 aa15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 Nos1Q9Z0J4 1429 aa15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 InsrP15208 1372 aa15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 Setd1aE9PYH6 1716 aa15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 SlkO54988 1233 aa15.09■□□□□ 0.01
Herc4-208ENSMUST00000219577 Prrc2bQ7TPM1 1486 aaKnown RBP15.08■□□□□ 0.01
Herc4-208ENSMUST00000219577 Catsper2A2ARP9 588 aa15.08■□□□□ 0.01
Herc4-208ENSMUST00000219577 Q3TQI7 289 aaKnown RBP15.08■□□□□ 0
Herc4-208ENSMUST00000219577 Rtf1A2AQ19 715 aaKnown RBP15.08■□□□□ 0
Herc4-208ENSMUST00000219577 Gnai1B2RSH2 354 aa15.07■□□□□ 0
Herc4-208ENSMUST00000219577 Gnai3Q9DC51 354 aa15.07■□□□□ 0
Herc4-208ENSMUST00000219577 Kidins220E9Q9B7 1793 aa15.07■□□□□ 0
Herc4-208ENSMUST00000219577 Kdm5aQ3UXZ9 1690 aa15.07■□□□□ 0
Herc4-208ENSMUST00000219577 Gm21190A0A0G2JGJ6 266 aa15.06■□□□□ 0
Herc4-208ENSMUST00000219577 Aifm3Q3TY86 605 aa15.06■□□□□ 0
Herc4-208ENSMUST00000219577 Yeats2Q3TUF7 1407 aa15.06■□□□□ 0
Herc4-208ENSMUST00000219577 Abca8bQ8K440 1620 aa15.06■□□□□ 0
Herc4-208ENSMUST00000219577 FanciQ8K368 1330 aa15.06■□□□□ 0
Herc4-208ENSMUST00000219577 CalcaP70160 136 aa15.06■□□□□ 0
Herc4-208ENSMUST00000219577 AnkarA2RT91 1465 aa15.05■□□□□ 0
Herc4-208ENSMUST00000219577 Robo2Q7TPD3 1470 aa15.05■□□□□ -0
Herc4-208ENSMUST00000219577 Snap23O09044 210 aa15.05■□□□□ -0
Herc4-208ENSMUST00000219577 Ttc41Q692V3 1318 aa15.04■□□□□ -0
Herc4-208ENSMUST00000219577 Hsp90b1P08113 802 aaKnown RBP15.04■□□□□ -0
Herc4-208ENSMUST00000219577 Ssh1Q76I79 1042 aa15.04■□□□□ -0
Herc4-208ENSMUST00000219577 Eif4g2Q62448 906 aaKnown RBP15.03■□□□□ -0
Herc4-208ENSMUST00000219577 Dmrtc1Q9D9R7 182 aa15.03■□□□□ -0
Herc4-208ENSMUST00000219577 Zfyve16Q80U44 1528 aa15.03■□□□□ -0
Herc4-208ENSMUST00000219577 Chd1P40201 1711 aa15.03■□□□□ -0
Herc4-208ENSMUST00000219577 Gprasp1Q5U4C1 1347 aa15.03■□□□□ -0
Herc4-208ENSMUST00000219577 Ankrd50F7BE84 1390 aa15.03■□□□□ -0
Herc4-208ENSMUST00000219577 Vamp4O70480 141 aa15.02■□□□□ -0
Herc4-208ENSMUST00000219577 Aldh1l1Q8R0Y6 902 aa15.02■□□□□ -0
Herc4-208ENSMUST00000219577 Znf692Q3U381 531 aa15.02■□□□□ -0
Herc4-208ENSMUST00000219577 CarsQ9ER72 831 aaKnown RBP15.02■□□□□ -0
Herc4-208ENSMUST00000219577 Q9D2X8 372 aa15.02□□□□□ -0.01
Herc4-208ENSMUST00000219577 Ccdc171E9Q1U1 1324 aa15.02□□□□□ -0.01
Herc4-208ENSMUST00000219577 Tbc1d32Q3URV1 1296 aa15.01□□□□□ -0.01
Herc4-208ENSMUST00000219577 MvpQ9EQK5 861 aa15.01□□□□□ -0.01
Herc4-208ENSMUST00000219577 Nsfl1cQ9CZ44 370 aaKnown RBP15.01□□□□□ -0.01
Herc4-208ENSMUST00000219577 Map3k19E9Q3S4 1311 aa15□□□□□ -0.01
Herc4-208ENSMUST00000219577 Xrn1P97789 1719 aaKnown RBP15□□□□□ -0.01
Herc4-208ENSMUST00000219577 Prim1P20664 417 aa15□□□□□ -0.01
Herc4-208ENSMUST00000219577 Phlpp2Q8BXA7 1320 aa15□□□□□ -0.01
Herc4-208ENSMUST00000219577 Bcl2l13P59017 434 aa15□□□□□ -0.01
Herc4-208ENSMUST00000219577 FanclQ9CR14 375 aa15□□□□□ -0.01
Herc4-208ENSMUST00000219577 HnrnpuQ8VEK3 800 aaKnown RBP14.99□□□□□ -0.01
Herc4-208ENSMUST00000219577 Tbc1d9Q3UYK3 1264 aa14.99□□□□□ -0.01
Herc4-208ENSMUST00000219577 TmpoQ61033 693 aaKnown RBP14.98□□□□□ -0.01
Herc4-208ENSMUST00000219577 Trim44Q9QXA7 346 aa14.98□□□□□ -0.01
Herc4-208ENSMUST00000219577 Skint5A7XUY5 1461 aa14.98□□□□□ -0.01
Herc4-208ENSMUST00000219577 Terf2O35144 541 aa14.98□□□□□ -0.01
Herc4-208ENSMUST00000219577 PtmaP26350 111 aa14.98□□□□□ -0.01
Herc4-208ENSMUST00000219577 Nol12Q8BG17 217 aa14.98□□□□□ -0.01
Herc4-208ENSMUST00000219577 Znf521Q6KAS7 1311 aa14.97□□□□□ -0.01
Herc4-208ENSMUST00000219577 Rims1Q99NE5 1463 aa14.97□□□□□ -0.01
Herc4-208ENSMUST00000219577 Uggt2E9Q4X2 1504 aa14.97□□□□□ -0.01
Herc4-208ENSMUST00000219577 Ppp1r15aP17564 657 aa14.97□□□□□ -0.01
Herc4-208ENSMUST00000219577 Tubgcp6G5E8P0 1769 aa14.96□□□□□ -0.01
Herc4-208ENSMUST00000219577 Hecw1Q8K4P8 1604 aa14.96□□□□□ -0.01
Herc4-208ENSMUST00000219577 Nsd3Q6P2L6 1439 aa14.96□□□□□ -0.01
Herc4-208ENSMUST00000219577 Fam135bQ9DAI6 1403 aa14.96□□□□□ -0.01
Herc4-208ENSMUST00000219577 Ciz1Q8VEH2 845 aa14.96□□□□□ -0.01
Herc4-208ENSMUST00000219577 Efcab6Q6P1E8 1516 aa14.96□□□□□ -0.01
Herc4-208ENSMUST00000219577 Ttc21aQ8C0S4 1314 aa14.96□□□□□ -0.02
Herc4-208ENSMUST00000219577 Brd1E9PZ26 1189 aaKnown RBP14.96□□□□□ -0.02
Herc4-208ENSMUST00000219577 Fchsd2Q3USJ8 740 aa14.96□□□□□ -0.02
Herc4-208ENSMUST00000219577 Sv2bQ8BG39 683 aa14.96□□□□□ -0.02
Herc4-208ENSMUST00000219577 Chmp4bQ9D8B3 224 aaKnown RBP14.96□□□□□ -0.02
Herc4-208ENSMUST00000219577 Phactr2B1AVP0 632 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Ankrd44B2RXR6 993 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Rsph6aQ8CDR2 708 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Wdr63B2RY71 923 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Prkar2bP31324 416 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Rsph3aQ3UFY4 516 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Idi2Q8BFZ6 227 aa14.95□□□□□ -0.02
Herc4-208ENSMUST00000219577 Eif4a2P10630 407 aa14.94□□□□□ -0.02
Herc4-208ENSMUST00000219577 AU015836B2RUM3 263 aa14.94□□□□□ -0.02
Herc4-208ENSMUST00000219577 Slc4a10Q5DTL9 1118 aa14.94□□□□□ -0.02
Herc4-208ENSMUST00000219577 Iqgap3F8VQ29 1632 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Trim27Q62158 513 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Pdcd11Q6NS46 1862 aaKnown RBP14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Hmox1P14901 289 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Ccne1Q61457 408 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Erich6bQ9D4S6 220 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Depdc5P61460 1591 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Neurl4Q5NCX5 1563 aa14.93□□□□□ -0.02
Herc4-208ENSMUST00000219577 Itsn2Q9Z0R6 1659 aa14.92□□□□□ -0.02
Herc4-208ENSMUST00000219577 Fam83gQ5SWY7 812 aa14.92□□□□□ -0.02
Herc4-208ENSMUST00000219577 Ap3b2Q9JME5 1082 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms