RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Pola1P33609 1465 aa11.49□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Atf7ipQ7TT18 1306 aa11.49□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 MlecQ6ZQI3 291 aaKnown RBP11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Smc5Q8CG46 1101 aaKnown RBP11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Setd1aE9PYH6 1716 aa11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Mfap1aC0HKD8 439 aaKnown RBP11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Mfap1bC0HKD9 439 aaKnown RBP11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Ercc6l2Q9JIM3 1537 aa11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Map3k19E9Q3S4 1311 aa11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Ggnbp2Q5SV77 696 aa11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Cabp4Q8VHC5 271 aa11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Hfm1D3Z4R1 1434 aa11.48□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Kdm5aQ3UXZ9 1690 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 InsrP15208 1372 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Ccdc183A2AJB1 534 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 AU019823E9PUQ3 292 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Kiaa0556Q8C753 1610 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Vsig10D3YX43 558 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Mre11Q61216 706 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Usp16Q99LG0 825 aa11.47□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 G3bp1P97855 465 aaKnown RBP11.46□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Stk11ipQ3TAA7 1072 aa11.46□□□□□ -0.57
Hmgcs1-201ENSMUST00000179869 Knl1Q66JQ7 1612 aa11.46□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 RereQ80TZ9 1558 aa11.46□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Map4k4P97820 1233 aaKnown RBP11.46□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Gm21190A0A0G2JGJ6 266 aa11.45□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 GorabQ8BRM2 368 aa11.45□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Nckap5lQ6GQX2 1323 aa11.45□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Talpid3E9PV87 1520 aa11.45□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Atp10aO54827 1508 aa11.45□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Cdk5rap2Q8K389 1822 aa11.45□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Abca8aQ8K442 1620 aa11.44□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Cavin4A2AMM0 362 aa11.44□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Aifm3Q3TY86 605 aa11.43□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Tmem131lQ3U3D7 1597 aa11.43□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 CastP51125 788 aa11.43□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Cdc37l1Q9CZP7 335 aa11.43□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 PtprmP28828 1452 aa11.42□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Itsn2Q9Z0R6 1659 aa11.42□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Swt1Q9DBQ9 907 aa11.42□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Tmem132eQ6IEE6 982 aa11.42□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Naip7Q9JIB3 1402 aa11.42□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Chmp4cQ9D7F7 232 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 TnikP83510 1323 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Cep152A2AUM9 1736 aaKnown RBP11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Myom2Q14BI5 1463 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Ccdc146E9Q9F7 977 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Prim1P20664 417 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Tnpo1Q8BFY9 898 aaKnown RBP11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Uhrf1bp1lA2RSJ4 1457 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Gprasp1Q5U4C1 1347 aa11.41□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Topbp1Q6ZQF0 1515 aa11.4□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 NpatQ8BMA5 1420 aa11.4□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Triml2E9PW10 424 aa11.4□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 Q3UJC8 639 aa11.4□□□□□ -0.58
Hmgcs1-201ENSMUST00000179869 FanciQ8K368 1330 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ahdc1Q6PAL7 1594 aaKnown RBP11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Akap12Q9WTQ5 1684 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ehbp1l1Q99MS7 1716 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Q3UPC7 1272 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Plekhm2Q80TQ5 1018 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Uggt1Q6P5E4 1551 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Idi1P58044 227 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Cog6Q8R3I3 657 aa11.39□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Adgrl1Q80TR1 1466 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Bcl2l13P59017 434 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 CalcaP70160 136 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ccne1Q61457 408 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Dnttip2Q8R2M2 758 aaKnown RBP11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Stk31Q99MW1 1018 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Gm10563F6WIE4 79 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Eif4a2P10630 407 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Slc35g1Q8BY79 368 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Tmem94Q7TSH8 1360 aa11.38□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Mroh1E0CZ22 1640 aa11.37□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Fgd1P52734 960 aa11.37□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Plcb2A3KGF7 1181 aa11.37□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 DekQ7TNV0 380 aaKnown RBP11.37□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Myom1Q62234 1667 aaKnown RBP11.37□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Znf692Q3U381 531 aa11.37□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Cdc42bpgQ80UW5 1551 aa11.36□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Rsph6aQ8CDR2 708 aa11.36□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Smarca5Q91ZW3 1051 aaKnown RBP11.36□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ric3Q8BPM6 367 aa11.36□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Qser1A2BIE1 1698 aa11.36□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ppp1r9bQ6R891 817 aaKnown RBP11.35□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Htatsf1Q8BGC0 757 aa11.35□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ankrd50F7BE84 1390 aa11.35□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Synj2Q9D2G5 1434 aa11.35□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Rfx1P48377 963 aa11.35□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ppp2r3aB2RXC8 1150 aa11.35□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ddx17Q501J6 650 aaKnown RBP11.34□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Ap3b2Q9JME5 1082 aa11.34□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Vamp4O70480 141 aa11.33□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 TmpoQ61033 693 aaKnown RBP11.33□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 Idi2Q8BFZ6 227 aa11.33□□□□□ -0.59
Hmgcs1-201ENSMUST00000179869 CltcQ68FD5 1675 aaKnown RBP11.33□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Dennd6aQ8BH65 605 aa11.33□□□□□ -0.6
Hmgcs1-201ENSMUST00000179869 Kif18aQ91WD7 886 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms