RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Ercc6lQ8BHK9 1240 aa9.15□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Kdm4aQ8BW72 1064 aa9.15□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Syce3B5KM66 88 aa9.15□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Cavin1O54724 392 aa9.15□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Kcnj4P52189 445 aa9.15□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Taf3Q5HZG4 932 aa9.15□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Rasa1E9PYG6 1038 aa9.15□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Pnma3Q8JZW8 466 aa9.15□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Cetn4Q8K4K1 168 aa9.15□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Cald1E9QA15 768 aaKnown RBP9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Kdm2aP59997 1161 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Hvcn1Q3U2S8 269 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Lrrc9Q8CDN9 1456 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 PtprgQ05909 1442 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Sbno1Q689Z5 1390 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Gpatch11Q3UFS4 262 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Sass6Q80UK7 654 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Irx4Q9QY61 515 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Fmn2Q9JL04 1578 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Adgrl2Q8JZZ7 1487 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Cers3Q1A3B0 383 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Kif2cQ922S8 721 aa9.14□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Zscan25B2RX31 543 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Fam184aE9PW83 1143 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Tfip11Q9ERA6 838 aaKnown RBP9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Srcin1Q9QWI6 1250 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Atp7aQ64430 1491 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Fam208aQ69ZR9 1610 aaKnown RBP9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Cspp1B2RX88 1205 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Tbc1d31Q6NXY1 996 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Atp10dQ8K2X1 1416 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Prdm16A2A935 1275 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Olfml1Q8BSH2 233 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Phf23Q8BSN5 401 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Usp19Q3UJD6 1360 aa9.13□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Abcc1O35379 1528 aa9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Pnmal2G3X9N3 661 aa9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Tpm3P21107 285 aaKnown RBP9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 MpndQ3TV65 487 aa9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Uspl1Q3ULM6 1089 aa9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Ptgs1P22437 602 aa9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Myom2Q14BI5 1463 aa9.12□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Ncbp1Q3UYV9 790 aaKnown RBP9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Kif3bQ61771 747 aa9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Dot1lQ6XZL8 1540 aa9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Cdkn1cP49919 348 aa9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Rbm27Q5SFM8 1060 aaKnown RBP9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Cgnl1Q6AW69 1298 aa9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Atp2b3Q0VF55 1220 aa9.11□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Prdm10Q3UTQ7 1184 aa9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Nek4Q9Z1J2 792 aa9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Trap1aP19473 224 aa9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Sh3bp1P55194 680 aa9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Map4k4P97820 1233 aaKnown RBP9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 AcrbpQ3V140 540 aa9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 BbxQ8VBW5 907 aa9.1□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Tpd52l1O54818 204 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 U2af2P26369 475 aaKnown RBP9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Rangap1P46061 589 aaKnown RBP9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Gm16486A0A1D5RMD1 1434 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Stk24Q99KH8 431 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Chd1lQ9CXF7 900 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Ccdc146E9Q9F7 977 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Znf608Q56A10 1511 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 KdrP35918 1367 aa9.09□□□□□ -0.95
Bdnf-204ENSMUST00000111044 Wwc1Q5SXA9 1104 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Serpina10Q8R121 448 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Brd1E9PZ26 1189 aaKnown RBP9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Atp6v1dP57746 247 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Nucb2P81117 420 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Bms1Q6PGF5 1284 aaKnown RBP9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Lemd3Q9WU40 921 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Sall3Q62255 1320 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 AI481877A2ALV5 1481 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Gm32742A0A1B0GT42 1604 aa9.08□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Sox12Q04890 314 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Tbc1d9Q3UYK3 1264 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Gas2l2Q5SSG4 860 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Znf330Q922H9 316 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Chmp4cQ9D7F7 232 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 GsdmaQ9EST1 446 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Ythdc2B2RR83 1445 aaKnown RBP9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 AU019823E9PUQ3 292 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 St18Q80TY4 1045 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 HnrnpuQ8VEK3 800 aaKnown RBP9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 NmiO35309 314 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Bach2P97303 839 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Igf1rQ60751 1373 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Cfap74Q3UY96 1578 aa9.07□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Anapc15-psA0A140T8L6 141 aa9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Pcmtd1P59913 357 aa9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Rnf17Q99MV7 1640 aa9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Gm20521D3Z5F7 333 aa9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Dnajc2P54103 621 aaKnown RBP9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Adcy5P84309 1262 aa9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Utp3Q9JI13 469 aaKnown RBP9.06□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Wdr63B2RY71 923 aa9.05□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Atxn3Q9CVD2 355 aa9.05□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Arglu1Q3UL36 271 aaKnown RBP9.05□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Rbm42Q91V81 474 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms