RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Nol12Q8BG17 217 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cep57l1Q8VDS7 400 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 CenphQ9QYM8 241 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cdc45Q9Z1X9 566 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Ncoa2Q61026 1462 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Ppp6r1Q7TSI3 856 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Rapgef2Q8CHG7 1496 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Gm21190A0A0G2JGJ6 266 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Adck5Q80V03 582 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Rab3gap2Q8BMG7 1366 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Abcd1P48410 736 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Gnai2P08752 355 aaKnown RBP12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cdkl5Q3UTQ8 938 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Erc1Q99MI1 1120 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Nphp1Q9QY53 687 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Mink1Q9JM52 1308 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Pafah1b1P63005 410 aaKnown RBP12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cep89Q9CZX2 791 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Ccdc181Q80ZU5 509 aa12.67□□□□□ -0.38
Vcan-202ENSMUST00000109544 Washc2Q6PGL7 1334 aa12.66□□□□□ -0.38
Vcan-202ENSMUST00000109544 Nup88Q8CEC0 753 aaKnown RBP12.66□□□□□ -0.38
Vcan-202ENSMUST00000109544 Lrrfip1Q3UZ39 729 aaKnown RBP12.66□□□□□ -0.38
Vcan-202ENSMUST00000109544 Vps8Q0P5W1 1427 aa12.66□□□□□ -0.38
Vcan-202ENSMUST00000109544 Lmbr1Q9JIT0 490 aa12.66□□□□□ -0.38
Vcan-202ENSMUST00000109544 Slc13a4Q8BZ82 625 aa12.66□□□□□ -0.38
Vcan-202ENSMUST00000109544 Ssh1Q76I79 1042 aa12.65□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cyp26c1B2RXA7 518 aa12.65□□□□□ -0.38
Vcan-202ENSMUST00000109544 Agtpbp1Q641K1 1218 aa12.65□□□□□ -0.38
Vcan-202ENSMUST00000109544 Larp1Q6ZQ58 1072 aaKnown RBP12.65□□□□□ -0.38
Vcan-202ENSMUST00000109544 LarsQ8BMJ2 1178 aa12.65□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cnnm3Q32NY4 713 aa12.65□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ehmt1Q5DW34 1296 aa12.65□□□□□ -0.39
Vcan-202ENSMUST00000109544 Mctp1E9PV86 951 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Lamb3Q61087 1168 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Prpf4bQ61136 1007 aaKnown RBP12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Slu7Q8BHJ9 585 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Crybg2B7ZCC2 1516 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Gm10471E9Q1C7 252 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ift57Q8BXG3 429 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 PsapQ61207 557 aaKnown RBP12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Mphosph10Q810V0 681 aaKnown RBP12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ttll5Q8CHB8 1328 aa12.64□□□□□ -0.39
Vcan-202ENSMUST00000109544 Fyb1O35601 819 aa12.63□□□□□ -0.39
Vcan-202ENSMUST00000109544 Mipol1Q9D9F8 279 aa12.63□□□□□ -0.39
Vcan-202ENSMUST00000109544 Trim30cD3YVI9 513 aa12.63□□□□□ -0.39
Vcan-202ENSMUST00000109544 Stk3Q9JI10 497 aa12.63□□□□□ -0.39
Vcan-202ENSMUST00000109544 Wasf1Q8R5H6 559 aa12.63□□□□□ -0.39
Vcan-202ENSMUST00000109544 Kcnh8P59111 1102 aa12.62□□□□□ -0.39
Vcan-202ENSMUST00000109544 Pdcl2Q78Y63 240 aa12.62□□□□□ -0.39
Vcan-202ENSMUST00000109544 HypkQ9CR41 129 aa12.62□□□□□ -0.39
Vcan-202ENSMUST00000109544 Wdr33Q8K4P0 1330 aaKnown RBP12.62□□□□□ -0.39
Vcan-202ENSMUST00000109544 ImpactO55091 318 aa12.62□□□□□ -0.39
Vcan-202ENSMUST00000109544 IncenpQ9WU62 880 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Phldb1Q6PDH0 1371 aaKnown RBP12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Paxip1Q6NZQ4 1056 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 ScaperF8VQ70 1398 aaKnown RBP12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Spata24Q6P926 205 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Fez2Q6TYB5 348 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Cfap53Q9D439 514 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Prdm16A2A935 1275 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 CftrP26361 1476 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Nectin2P32507 530 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ppp2r1aQ76MZ3 589 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Gm7361D3Z6R1 267 aa12.61□□□□□ -0.39
Vcan-202ENSMUST00000109544 Eif5P59325 429 aaKnown RBP12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Zfp444Q3TDV8 331 aaKnown RBP12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 NinlQ6ZQ12 1394 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Trap1aP19473 224 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ddx46Q569Z5 1032 aaKnown RBP12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 TefQ9JLC6 301 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Cc2d2bA0A286YDU8 1405 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Tspyl3Q3UYP3 334 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Abcf1Q6P542 837 aaKnown RBP12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Cetn2Q9R1K9 172 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Sel1lQ9Z2G6 790 aa12.6□□□□□ -0.39
Vcan-202ENSMUST00000109544 Eva1cP58659 440 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Kif18aQ91WD7 886 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Gm42641I6L9G2 585 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Hs1bp3Q3TC93 395 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 AtripQ8BMG1 785 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ccdc191J3QQ27 883 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Stard3nlQ9DCI3 235 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Ncbp3Q8BZR9 615 aaKnown RBP12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Erlin1Q91X78 346 aa12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Gnl2Q99LH1 728 aaKnown RBP12.59□□□□□ -0.39
Vcan-202ENSMUST00000109544 Gm21671G3UY31 267 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Rnf187Q8BFX1 236 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Pdia4P08003 638 aaKnown RBP12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Krt84Q99M73 603 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Gm18336A0A140LIU8 765 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Hvcn1Q3U2S8 269 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Cep131Q62036 1060 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 ImmtQ8CAQ8 757 aaKnown RBP12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Efcab5A0JP43 1406 aa12.58□□□□□ -0.4
Vcan-202ENSMUST00000109544 Hdgfl1Q2VPR5 283 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Top1mtQ8R4U6 593 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Zscan20B2KFW1 1030 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Paxbp1P58501 919 aa12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Puf60Q3UEB3 564 aaKnown RBP12.57□□□□□ -0.4
Vcan-202ENSMUST00000109544 Plekhg5Q66T02 1073 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms