RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 5031410I06RikE9Q4E0 267 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gm1979E9QAN3 267 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gm5862K7N5V5 267 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gm10220K7N660 267 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Lamc3Q9R0B6 1581 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Mug1P28665 1476 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Zkscan2G3X952 960 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 March6Q6ZQ89 909 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Slx4Q6P1D7 1565 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Cwc27Q3TKY6 469 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 UvssaQ9D479 717 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gimap6Q8K349 305 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Cdc37l1Q9CZP7 335 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Nphp1Q9QY53 687 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Map3k13Q1HKZ5 959 aa13.31□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Fam163aQ8CAA5 168 aa13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Nol8Q3UHX0 1147 aaKnown RBP13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Cchcr1Q8K2I2 770 aa13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Washc4Q3UMB9 1173 aa13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Ints3Q7TPD0 1041 aaKnown RBP13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Tnpo1Q8BFY9 898 aaKnown RBP13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Agtpbp1Q641K1 1218 aa13.3□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Dixdc1Q80Y83 711 aa13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gtf3c3Q3TMP1 882 aa13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Eif4g1Q6NZJ6 1600 aaKnown RBP13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 AqrQ8CFQ3 1481 aaKnown RBP13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Hdgfl1Q2VPR5 283 aa13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Btbd11Q6GQW0 1109 aa13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Exoc6bA6H5Z3 810 aa13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 A0A0U1RNP2 1173 aa13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Ncbp3Q8BZR9 615 aaKnown RBP13.29□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Srgap3Q812A2 1099 aa13.28□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gm21680A0A0G2JGR8 267 aa13.28□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Asxl1P59598 1514 aa13.28□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Cfap99A0A140LIX9 648 aa13.28□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Tmc1Q8R4P5 757 aa13.28□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Sall3Q62255 1320 aa13.27□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Mcm2P97310 904 aa13.27□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Naip2Q9QUK4 1447 aa13.27□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Paf1Q8K2T8 535 aa13.27□□□□□ -0.28
Scn8a-203ENSMUST00000108908 WizO88286 1684 aaKnown RBP13.27□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Plekhd1B2RPU2 505 aa13.27□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ankrd26Q811D2 1581 aa13.27□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Plekhg5Q66T02 1073 aa13.27□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Rnf214Q8BFU3 668 aaKnown RBP13.27□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ttc19Q8CC21 365 aa13.27□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Fam50bQ9WTJ8 334 aa13.27□□□□□ -0.29
Scn8a-203ENSMUST00000108908 AnlnQ8K298 1121 aaKnown RBP13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Rbm28Q8CGC6 750 aaKnown RBP13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Cog6Q8R3I3 657 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Odf2lQ9D478 642 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Grin2aP35436 1464 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ipo7Q9EPL8 1038 aaKnown RBP13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 PrxO55103 1391 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Abcc5Q9R1X5 1436 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Fnbp4Q6ZQ03 1031 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Stard3nlQ9DCI3 235 aa13.26□□□□□ -0.29
Scn8a-203ENSMUST00000108908 PsapQ61207 557 aaKnown RBP13.25□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Mapk8ip1Q9WVI9 707 aa13.25□□□□□ -0.29
Scn8a-203ENSMUST00000108908 IbtkQ6ZPR6 1352 aaKnown RBP13.25□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Trim29Q8R2Q0 587 aa13.25□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Hmgn5Q9JL35 406 aa13.25□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ell2Q3UKU1 639 aa13.24□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Sugp2Q8CH09 1067 aa13.24□□□□□ -0.29
Scn8a-203ENSMUST00000108908 TkfcQ8VC30 578 aa13.24□□□□□ -0.29
Scn8a-203ENSMUST00000108908 GphnQ8BUV3 769 aaKnown RBP13.24□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Znf704Q9ERQ3 566 aa13.24□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ttc21bQ0HA38 1315 aa13.24□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Kif18aQ91WD7 886 aa13.23□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ftsj3Q9DBE9 838 aaKnown RBP13.23□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Kif3aP28741 701 aa13.23□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Jakmip1Q8BVL9 626 aa13.23□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Gcc1Q9D4H2 778 aa13.23□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Fchsd2Q3USJ8 740 aa13.22□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Flad1Q8R123 492 aa13.22□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Ubxn4Q8VCH8 506 aa13.22□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Taf3Q5HZG4 932 aa13.22□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Eif3aP23116 1344 aaKnown RBP13.22□□□□□ -0.29
Scn8a-203ENSMUST00000108908 IkQ9Z1M8 557 aaKnown RBP13.21□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Maco1Q7TQE6 664 aaKnown RBP13.21□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Q9D9S1 216 aa13.21□□□□□ -0.29
Scn8a-203ENSMUST00000108908 Gcom1E9PZ54 550 aa13.21□□□□□ -0.3
Scn8a-203ENSMUST00000108908 MyzapQ3UIJ9 466 aa13.21□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Q3UJC8 639 aa13.21□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Trim34bJ3QNR8 485 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 TbcaP48428 108 aaKnown RBP13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 TmpoQ61033 693 aaKnown RBP13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ppp4r3bQ922R5 820 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 4930572O03RikQ8C5Y0 211 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 OptnQ8K3K8 584 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 MvpQ9EQK5 861 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 ApobrQ8VBT6 942 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Kdm4aQ8BW72 1064 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Atxn3Q9CVD2 355 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Thoc2B1AZI6 1594 aaKnown RBP13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 1700010I14RikQ7TPG0 532 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Tspyl2Q7TQI8 677 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Rapgef6Q5NCJ1 1609 aa13.2□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ehmt1Q5DW34 1296 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Sycp1Q62209 993 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms