RNA–Protein interactions for RNA: ENSMUST00000056781.4

Ccdc57-201, Transcript of Coiled-coil domain-containing protein 57, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc57, Length 3,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc57-201ENSMUST00000056781 Utp3Q9JI13 469 aaKnown RBP13.33□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Gcc2Q8CHG3 1679 aa13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 EzrP26040 586 aaKnown RBP13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Gapvd1Q6PAR5 1458 aa13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Maco1Q7TQE6 664 aaKnown RBP13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Ubap1lG3UW59 384 aa13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 RdxP26043 583 aaKnown RBP13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Hs1bp3Q3TC93 395 aa13.32□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 E4f1Q8CCE9 783 aa13.31□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Il16O54824 1322 aa13.31□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Arhgap31A6X8Z5 1425 aa13.31□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Polr1aO35134 1717 aaKnown RBP13.31□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 4930548H24RikQ9D496 437 aa13.31□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Fbxo3Q9DC63 480 aa13.31□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Arhgap4B1AUY3 965 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 NmiO35309 314 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Apaf1O88879 1249 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Znf771Q8BJ90 317 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Wdr62Q3U3T8 1523 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Wdr63B2RY71 923 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Cnga1P29974 684 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Tomm22Q9CPQ3 142 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Brpf1B2RRD7 1212 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Nol12Q8BG17 217 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Arhgef40Q3UPH7 1517 aa13.3□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Erich6D3Z6S9 713 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Tmco5bQ80X59 307 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Cc2d1aQ8K1A6 943 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Swt1Q9DBQ9 907 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Cdkn1cP49919 348 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Kdm3bQ6ZPY7 1562 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Ccdc60Q8C4J0 545 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Podxl2Q8CAE9 603 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 CebpzP53569 1052 aaKnown RBP13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Cpa2Q504N0 417 aa13.29□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Card6E9PWH2 1175 aa13.28□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 MlecQ6ZQI3 291 aaKnown RBP13.28□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Gm16486A0A1D5RMD1 1434 aa13.28□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Supt6hQ62383 1726 aaKnown RBP13.28□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 CastP51125 788 aa13.28□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Ppip5k2Q6ZQB6 1129 aa13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Dixdc1Q80Y83 711 aa13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Rsph4aQ8BYM7 716 aa13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 DroshaQ5HZJ0 1373 aaKnown RBP13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Tarbp1E9Q368 1579 aa13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Nucb2P81117 420 aa13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 SrrtQ99MR6 875 aaKnown RBP13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 Gpatch8A2A6A1 1505 aa13.27□□□□□ -0.28
Ccdc57-201ENSMUST00000056781 RbsnQ80Y56 783 aa13.27□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 U2af1Q9D883 239 aaKnown RBP13.27□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 GsdmaQ9EST1 446 aa13.27□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Mmel1Q9JLI3 765 aa13.27□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Capn2O08529 700 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Cetn4Q8K4K1 168 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Fam184aE9PW83 1143 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Zdhhc9P59268 364 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Mx2Q9WVP9 655 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Oas2E9Q9A9 742 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Ecm2Q5FW85 670 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Ccdc96Q9CR92 584 aa13.26□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Prr29B1ARI9 187 aa13.25□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Sytl4Q9R0Q1 673 aa13.25□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Tbc1d8Q9Z1A9 1134 aa13.25□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Kiaa1107Q80TK0 1369 aa13.25□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Kiaa1211Q5PR69 1207 aa13.25□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 CenpqQ9CPQ5 267 aa13.25□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Ube2q2Q8K2Z8 378 aa13.24□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Zkscan5Q9Z1D8 819 aa13.24□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Rad54l2Q99NG0 1466 aa13.24□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Serpinb6bO08804 377 aa13.24□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Myom2Q14BI5 1463 aa13.24□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Dnajc2P54103 621 aaKnown RBP13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Ica1lQ3TY65 431 aa13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Zfp397Q7TNK4 527 aa13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Ddx41Q91VN6 622 aaKnown RBP13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Map4k4P97820 1233 aaKnown RBP13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 AatfQ9JKX4 526 aaKnown RBP13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 1700017N19RikA0A087WPJ1 469 aa13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Tubgcp6G5E8P0 1769 aa13.23□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Bach1P97302 739 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Utp14aQ640M1 767 aaKnown RBP13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 EngaseQ8BX80 734 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Cyp27a1Q9DBG1 533 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Kdm6bQ5NCY0 1641 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Rrbp1Q99PL5 1605 aaKnown RBP13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Cspp1B2RX88 1205 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Samm50Q8BGH2 469 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Mcm3P25206 812 aaKnown RBP13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Mctp2Q5RJH2 878 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 St18Q80TY4 1045 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Senp3Q9EP97 568 aaKnown RBP13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Clstn2Q9ER65 966 aa13.22□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Samd9lQ69Z37 1561 aa13.21□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Sbno1Q689Z5 1390 aa13.21□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Phactr2B1AVP0 632 aa13.21□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Dnajc5bQ9CQ94 199 aa13.21□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 CarsQ9ER72 831 aaKnown RBP13.21□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 Duox2A2AQ99 1517 aa13.21□□□□□ -0.29
Ccdc57-201ENSMUST00000056781 G3bp1P97855 465 aaKnown RBP13.21□□□□□ -0.3
Ccdc57-201ENSMUST00000056781 NexnQ7TPW1 607 aa13.21□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms