RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Prpf4bQ61136 1007 aaKnown RBP18.54■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Plekhh1Q80TI1 1356 aa18.54■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Gm42641I6L9G2 585 aa18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 AtripQ8BMG1 785 aa18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Rab11fip3Q8CHD8 1047 aa18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Eif5P59325 429 aaKnown RBP18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 MicalclQ9D5U9 680 aa18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Cfap58B2RW38 873 aa18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Gnl2Q99LH1 728 aaKnown RBP18.53■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Gm21190A0A0G2JGJ6 266 aa18.52■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Kcnh8P59111 1102 aa18.52■□□□□ 0.56
Ubr3-201ENSMUST00000055758 NexnQ7TPW1 607 aa18.52■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Phldb2Q8K1N2 1249 aa18.52■□□□□ 0.56
Ubr3-201ENSMUST00000055758 Mphosph10Q810V0 681 aaKnown RBP18.52■□□□□ 0.55
Ubr3-201ENSMUST00000055758 4921504E06RikQ8CET2 560 aa18.52■□□□□ 0.55
Ubr3-201ENSMUST00000055758 UvssaQ9D479 717 aa18.52■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Sytl4Q9R0Q1 673 aa18.52■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Ssr1Q9CY50 286 aaKnown RBP18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Skor2A7M7C7 1008 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Chrna2Q91X60 512 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Syce3B5KM66 88 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Gnai1B2RSH2 354 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Gnai3Q9DC51 354 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Zkscan2G3X952 960 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Samm50Q8BGH2 469 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Q9D9S1 216 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 NacadQ5SWP3 1504 aa18.51■□□□□ 0.55
Ubr3-201ENSMUST00000055758 IncenpQ9WU62 880 aa18.5■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Ccdc112A0AUP1 442 aa18.5■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Tango6Q8C3S2 1079 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Agtpbp1Q641K1 1218 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Luc7lQ9CYI4 371 aaKnown RBP18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Anapc15-psA0A140T8L6 141 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Jakmip1Q8BVL9 626 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Odf2lQ9D478 642 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Swt1Q9DBQ9 907 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Pmfbp1Q9WVQ0 1022 aa18.49■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Lrrcc1Q69ZB0 1026 aa18.48■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Bcl11bQ99PV8 884 aa18.48■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Dydc1Q9D9T0 175 aa18.48■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Erc1Q99MI1 1120 aa18.48■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Slu7Q8BHJ9 585 aa18.48■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Eva1cP58659 440 aa18.47■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Exoc8Q6PGF7 716 aa18.47■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Shq1Q7TMX5 569 aa18.47■□□□□ 0.55
Ubr3-201ENSMUST00000055758 SltmQ8CH25 1031 aaKnown RBP18.47■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Cog6Q8R3I3 657 aa18.47■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Mipol1Q9D9F8 279 aa18.46■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Skor1Q8BX46 964 aa18.46■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Stim1P70302 685 aa18.46■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Krt85Q9Z2T6 507 aa18.46■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Dhx8A2A4P0 1244 aaKnown RBP18.46■□□□□ 0.55
Ubr3-201ENSMUST00000055758 DmtnQ9WV69 405 aa18.46■□□□□ 0.55
Ubr3-201ENSMUST00000055758 Tex19.1Q99MV2 351 aa18.45■□□□□ 0.54
Ubr3-201ENSMUST00000055758 NcapgE9PWG6 1004 aa18.45■□□□□ 0.54
Ubr3-201ENSMUST00000055758 MlecQ6ZQI3 291 aaKnown RBP18.45■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Ppfibp2O35711 882 aa18.45■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Med4Q9CQA5 270 aa18.45■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Mcm2P97310 904 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 CenpqQ9CPQ5 267 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Sel1lQ9Z2G6 790 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Lrrc45Q8CIM1 670 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Ccnb3Q810T2 1396 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Sptbn5F6UCX4 1208 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Pip4k2aO70172 405 aa18.44■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Cpa2Q504N0 417 aa18.43■□□□□ 0.54
Ubr3-201ENSMUST00000055758 ClasrpQ8CFC7 668 aa18.43■□□□□ 0.54
Ubr3-201ENSMUST00000055758 PdiltQ9DAN1 588 aa18.43■□□□□ 0.54
Ubr3-201ENSMUST00000055758 TbcaP48428 108 aaKnown RBP18.43■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Cfap65Q3V0B4 1847 aa18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Sept7O55131 436 aa18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Nol7Q9D7Z3 254 aaKnown RBP18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Myh10Q61879 1976 aaKnown RBP18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Fmn1Q05860 1466 aa18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Jakmip2D3YXK0 820 aa18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Zhx1P70121 873 aa18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Nol8Q3UHX0 1147 aaKnown RBP18.42■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Kif18aQ91WD7 886 aa18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 UacaQ8CGB3 1411 aa18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Gigyf1Q99MR1 1044 aaKnown RBP18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Washc4Q3UMB9 1173 aa18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Pafah1b1P63005 410 aaKnown RBP18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Uri1Q3TLD5 531 aa18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 IkQ9Z1M8 557 aaKnown RBP18.41■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Nup88Q8CEC0 753 aaKnown RBP18.4■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Q7TT23 1179 aa18.4■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Sart1Q9Z315 806 aaKnown RBP18.4■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Tspyl3Q3UYP3 334 aa18.39■□□□□ 0.54
Ubr3-201ENSMUST00000055758 SlmapQ3URD3 845 aa18.39■□□□□ 0.54
Ubr3-201ENSMUST00000055758 Kif20aP97329 887 aa18.39■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Vps41Q5KU39 853 aa18.38■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Ccdc191J3QQ27 883 aa18.38■□□□□ 0.53
Ubr3-201ENSMUST00000055758 TxlnaQ6PAM1 554 aaKnown RBP18.38■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Psmd1Q3TXS7 953 aa18.38■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Nap1l2P51860 460 aa18.38■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Gnai2P08752 355 aaKnown RBP18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Zfp444Q3TDV8 331 aaKnown RBP18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Cfap57Q9D180 1249 aa18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Paip2Q9D6V8 124 aa18.37■□□□□ 0.53
Ubr3-201ENSMUST00000055758 Ddx46Q569Z5 1032 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms