RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 AampJ3QN89 436 aa12.36□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Fgd1P52734 960 aa12.36□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 G3bp1P97855 465 aaKnown RBP12.35□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Cavin4A2AMM0 362 aa12.35□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Map7O88735 730 aa12.35□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Slc52a2Q9D8F3 450 aa12.35□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Antxr1Q9CZ52 562 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 MaddQ80U28 1577 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Trpm1Q2TV84 1622 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Rfx1P48377 963 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Kif2cQ922S8 721 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Hfm1D3Z4R1 1434 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Ankrd50F7BE84 1390 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Adgrl3Q80TS3 1537 aa12.34□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Plcb2A3KGF7 1181 aa12.33□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Slc12a5Q91V14 1138 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 PalmQ9Z0P4 383 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 NinlQ6ZQ12 1394 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Topbp1Q6ZQF0 1515 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Ttc37F8VPK0 1563 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 GorabQ8BRM2 368 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Q9D9H8 365 aa12.33□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Birc3O08863 600 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Terf2O35144 541 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 SkilQ60665 675 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Utp14aQ640M1 767 aaKnown RBP12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Ssh1Q76I79 1042 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Plxnc1Q9QZC2 1574 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Ttc21aQ8C0S4 1314 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Gsto1O09131 240 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Atp2b2Q9R0K7 1198 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Adgrl1Q80TR1 1466 aa12.32□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Kiaa0556Q8C753 1610 aa12.31□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Plin1Q8CGN5 517 aa12.31□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Znf316Q6PGE4 1016 aa12.31□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Nsfl1cQ9CZ44 370 aaKnown RBP12.31□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Eif2ak4Q9QZ05 1648 aa12.31□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Cdk19Q8BWD8 501 aa12.31□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Depdc5P61460 1591 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 AU015836B2RUM3 263 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Mcm4P49717 862 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Swt1Q9DBQ9 907 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Nrxn1Q9CS84 1514 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Ino80Q6ZPV2 1559 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Plekhm2Q80TQ5 1018 aa12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 KnstrnQ9D9Z1 312 aaKnown RBP12.29□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Vsig10D3YX43 558 aa12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Q3UPC7 1272 aa12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 DekQ7TNV0 380 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Prdm2A2A7B5 1709 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Cep170bQ80U49 1574 aa12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Brd1E9PZ26 1189 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Tfip11Q9ERA6 838 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Tecpr2Q3UH45 1423 aa12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 U2surpQ6NV83 1029 aaKnown RBP12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Ccdc171E9Q1U1 1324 aa12.28□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Prrc2bQ7TPM1 1486 aaKnown RBP12.27□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Cdc37l1Q9CZP7 335 aa12.27□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Kcnn1Q9EQR3 537 aa12.27□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Hecw2Q6I6G8 1578 aa12.27□□□□□ -0.44
Ccdc40-202ENSMUST00000053440 Il4rP16382 810 aa12.27□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Med14A2ABV5 1459 aaKnown RBP12.27□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Nsd3Q6P2L6 1439 aa12.27□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Hs1bp3Q3TC93 395 aa12.27□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Mroh1E0CZ22 1640 aa12.26□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Mcm10Q0VBD2 885 aa12.26□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Q4VA45 678 aa12.26□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Ift172Q6VH22 1749 aa12.26□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Dmrtc1Q9D9R7 182 aa12.26□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 FanciQ8K368 1330 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Ciz1Q8VEH2 845 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Knl1Q66JQ7 1612 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Stk11ipQ3TAA7 1072 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Ncbp3Q8BZR9 615 aaKnown RBP12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Aldh1l1Q8R0Y6 902 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Nek4Q9Z1J2 792 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Pik3r4Q8VD65 1358 aa12.25□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Ccdc146E9Q9F7 977 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Atp10aO54827 1508 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Vamp4O70480 141 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 MvpQ9EQK5 861 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 PaskQ8CEE6 1383 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Znf692Q3U381 531 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Tbc1d9Q3UYK3 1264 aa12.24□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 1700019A02RikA0A087WPV9 146 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Klhdc4Q921I2 584 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Cabp2Q9JLK4 216 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Wdr63B2RY71 923 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 SlkO54988 1233 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Pdcl3Q8BVF2 240 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Akap12Q9WTQ5 1684 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Usp16Q99LG0 825 aa12.23□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Dip2cE9PWR4 1557 aa12.22□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Yeats2Q3TUF7 1407 aa12.22□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Arhgap23Q69ZH9 1483 aa12.22□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Gm10093D3YYI8 482 aa12.22□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Hdac1O09106 482 aaKnown RBP12.22□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Uhrf1bp1B2KF50 1429 aa12.22□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 Ddit3P35639 168 aa12.21□□□□□ -0.45
Ccdc40-202ENSMUST00000053440 CarsQ9ER72 831 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms