RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Rbm28Q8CGC6 750 aaKnown RBP19.9■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Odf2A3KGV1 830 aaKnown RBP19.9■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Wdr78E9PYY5 807 aa19.9■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Kcnh8P59111 1102 aa19.9■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 PalmQ9Z0P4 383 aa19.89■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Cwc27Q3TKY6 469 aa19.89■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Cdc37l1Q9CZP7 335 aa19.89■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Evi5lH3BKQ3 813 aa19.88■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 IbtkQ6ZPR6 1352 aaKnown RBP19.88■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 PdcQ9QW08 244 aa19.88■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Plb1Q3TTY0 1478 aa19.87■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Naip2Q9QUK4 1447 aa19.87■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Odf2lQ9D478 642 aa19.87■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Ccdc43Q9CR29 222 aaKnown RBP19.87■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Ccdc34Q3UI66 367 aa19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Ggnbp2Q5SV77 696 aa19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Agtpbp1Q641K1 1218 aa19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Fbxo2Q80UW2 297 aa19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 HnrnpmQ9D0E1 729 aaKnown RBP19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Nol8Q3UHX0 1147 aaKnown RBP19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Mug1P28665 1476 aa19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 TkfcQ8VC30 578 aa19.86■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Jakmip1Q8BVL9 626 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Ftsj3Q9DBE9 838 aaKnown RBP19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Hoxa7P02830 229 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Gm21698A0A087WQP8 267 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Gm21671G3UY31 267 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Srgap3Q812A2 1099 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Samd1D3YXK1 519 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Gtf2f1Q3THK3 508 aaKnown RBP19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 March6Q6ZQ89 909 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Chrna2Q91X60 512 aa19.85■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Eif3aP23116 1344 aaKnown RBP19.84■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Smc2Q8CG48 1191 aaKnown RBP19.84■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Abl1P00520 1123 aa19.84■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 Arid4aF8VPQ2 1261 aaKnown RBP19.83■□□□□ 0.77
Ubfd1-201ENSMUST00000033158 TmpoQ61033 693 aaKnown RBP19.83■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Tubb6Q922F4 447 aa19.82■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Abcc5Q9R1X5 1436 aa19.82■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Babam1Q3UI43 333 aa19.82■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Necab1Q8BG18 352 aa19.82■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Znhit6Q3UFB2 460 aaKnown RBP19.82■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Lrrcc1Q69ZB0 1026 aa19.82■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Gcom1E9PZ54 550 aa19.81■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 MyzapQ3UIJ9 466 aa19.81■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 CarsQ9ER72 831 aaKnown RBP19.81■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Ttc21bQ0HA38 1315 aa19.81■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Sptbn5F6UCX4 1208 aa19.81■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 MvpQ9EQK5 861 aa19.81■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Prl7d1P04769 244 aa19.8■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 L3mbtl2P59178 703 aa19.8■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Maco1Q7TQE6 664 aaKnown RBP19.8■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Asxl1P59598 1514 aa19.8■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Rhot2Q8JZN7 620 aa19.79■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Fam193aQ8CGI1 1231 aaKnown RBP19.79■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 NexmifQ5DTT1 1515 aa19.79■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Stk38Q91VJ4 465 aa19.79■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Magi1Q6RHR9 1471 aa19.79■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Igf1rQ60751 1373 aa19.78■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Exoc6bA6H5Z3 810 aa19.78■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Rbm5Q91YE7 815 aaKnown RBP19.78■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Map4k4P97820 1233 aaKnown RBP19.78■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Sf3b2Q3UJB0 878 aaKnown RBP19.78■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Sytl4Q9R0Q1 673 aa19.78■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Sos1Q62245 1319 aa19.77■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Washc4Q3UMB9 1173 aa19.77■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 A2mQ6GQT1 1474 aa19.77■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 AqrQ8CFQ3 1481 aaKnown RBP19.77■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Speer4bQ9D9F7 267 aa19.77■□□□□ 0.76
Ubfd1-201ENSMUST00000033158 Tmc1Q8R4P5 757 aa19.77■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 A0A0U1RNP2 1173 aa19.76■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Plekhd1B2RPU2 505 aa19.76■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Cnnm3Q32NY4 713 aa19.76■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Top1mtQ8R4U6 593 aa19.76■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ddx54Q8K4L0 874 aaKnown RBP19.76■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Gm21680A0A0G2JGR8 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Map3k13Q1HKZ5 959 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ehmt1Q5DW34 1296 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Gm21663A0A0G2JE01 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Gm7361D3Z6R1 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 5031410I06RikE9Q4E0 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Gm1979E9QAN3 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Gm5862K7N5V5 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Gm10220K7N660 267 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Tspyl2Q7TQI8 677 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Aldh1l1Q8R0Y6 902 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Camsap1A2AHC3 1581 aa19.75■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Pdcl3Q8BVF2 240 aa19.74■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 4930572O03RikQ8C5Y0 211 aa19.74■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Sall3Q62255 1320 aa19.74■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Polr3aB2RXC6 1390 aa19.73■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Zrsr2Q62377 462 aaKnown RBP19.73■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Btbd11Q6GQW0 1109 aa19.73■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ppip5k2Q6ZQB6 1129 aa19.73■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ssh1Q76I79 1042 aa19.73■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ppp1r15aP17564 657 aa19.72■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ptpdc1Q6NZK8 747 aa19.72■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 Ttc19Q8CC21 365 aa19.72■□□□□ 0.75
Ubfd1-201ENSMUST00000033158 TbcaP48428 108 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms