RNA–Protein interactions for RNA: ENSMUST00000030336.10

Tnfrsf1b-201, Transcript of Tumor necrosis factor receptor superfamily member 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnfrsf1b, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1b-201ENSMUST00000030336 Abcc6Q9R1S7 1498 aa11.51□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Puf60Q3UEB3 564 aaKnown RBP11.51□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Zranb1Q7M760 708 aa11.51□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 U2af1Q9D883 239 aaKnown RBP11.51□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Q9D9H8 365 aa11.51□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Cul9Q80TT8 1865 aa11.5□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 GsdmaQ9EST1 446 aa11.5□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 AdgbG3UZ78 1657 aa11.5□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Prex1Q69ZK0 1650 aa11.5□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Cdc42bpgQ80UW5 1551 aa11.5□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Nectin2P32507 530 aa11.49□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 AatkQ80YE4 1365 aa11.49□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Tfip11Q9ERA6 838 aaKnown RBP11.49□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Kif18aQ91WD7 886 aa11.49□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 PogkQ80TC5 607 aa11.48□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Rbm10Q99KG3 930 aaKnown RBP11.48□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 AnkarA2RT91 1465 aa11.47□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Chrna2Q91X60 512 aa11.47□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Robo2Q7TPD3 1470 aa11.47□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Utp14aQ640M1 767 aaKnown RBP11.47□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Maco1Q7TQE6 664 aaKnown RBP11.47□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Tsen2Q6P7W5 460 aa11.46□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Trim44Q9QXA7 346 aa11.46□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Talpid3E9PV87 1520 aa11.46□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Uggt2E9Q4X2 1504 aa11.46□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Phlpp2Q8BXA7 1320 aa11.46□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Kif20aP97329 887 aa11.46□□□□□ -0.57
Tnfrsf1b-201ENSMUST00000030336 Dusp27Q148W8 1138 aa11.46□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Ppip5k1A2ARP1 1436 aa11.45□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Hfm1D3Z4R1 1434 aa11.45□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Irf5P56477 497 aa11.45□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Tmco5bQ80X59 307 aa11.45□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Qser1A2BIE1 1698 aa11.44□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Topbp1Q6ZQF0 1515 aa11.44□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Ccdc60Q8C4J0 545 aa11.44□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Exosc9Q9JHI7 438 aaKnown RBP11.44□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Map4k4P97820 1233 aaKnown RBP11.43□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Erbb4Q61527 1308 aa11.43□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Ccar1Q8CH18 1146 aaKnown RBP11.43□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Skint5A7XUY5 1461 aa11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Asxl2Q8BZ32 1370 aa11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 AU022751B1B0V2 589 aa11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Erich6bQ9D4S6 220 aa11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 IbtkQ6ZPR6 1352 aaKnown RBP11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Pdia4P08003 638 aaKnown RBP11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Atl3Q91YH5 541 aa11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Prrc2bQ7TPM1 1486 aaKnown RBP11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Dhx16G3X8X0 1044 aaKnown RBP11.42□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Fam135bQ9DAI6 1403 aa11.41□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Iqgap3F8VQ29 1632 aa11.41□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Znf316Q6PGE4 1016 aa11.41□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Knl1Q66JQ7 1612 aa11.41□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Cald1E9QA15 768 aaKnown RBP11.41□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Rrp12Q6P5B0 1295 aaKnown RBP11.4□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 CltcQ68FD5 1675 aaKnown RBP11.4□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 4933402E13RikQ9D4D2 429 aa11.4□□□□□ -0.58
Tnfrsf1b-201ENSMUST00000030336 Chmp4cQ9D7F7 232 aa11.4□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Efcab6Q6P1E8 1516 aa11.4□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Kiaa0556Q8C753 1610 aa11.4□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Bloc1s4Q8VED2 215 aa11.39□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Pola1P33609 1465 aa11.39□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Myom2Q14BI5 1463 aa11.39□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Ccdc146E9Q9F7 977 aa11.39□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Nek4Q9Z1J2 792 aa11.39□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 SkilQ60665 675 aa11.38□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Ripk4Q9ERK0 786 aa11.38□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Map7O88735 730 aa11.38□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Rsph3aQ3UFY4 516 aa11.38□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Stard8Q8K031 1019 aa11.38□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Akap12Q9WTQ5 1684 aa11.38□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Myo3aQ8K3H5 1613 aa11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Brd1E9PZ26 1189 aaKnown RBP11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 CastP51125 788 aa11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Kdm5aQ3UXZ9 1690 aa11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Rbm25B2RY56 838 aaKnown RBP11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Tbc1d9Q3UYK3 1264 aa11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Scaf11E9PZM7 1456 aaKnown RBP11.37□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Slc52a2Q9D8F3 450 aa11.36□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Pank2Q3U4S0 443 aa11.36□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Atp2b2Q9R0K7 1198 aa11.36□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Iqsec2Q5DU25 1478 aa11.36□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 CenpjQ569L8 1344 aa11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Ercc6l2Q9JIM3 1537 aa11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Gm10093D3YYI8 482 aa11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Hdac1O09106 482 aaKnown RBP11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 G3bp1P97855 465 aaKnown RBP11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Zfp91Q62511 572 aa11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Plin1Q8CGN5 517 aa11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Adgrb3Q80ZF8 1522 aa11.35□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Gprasp1Q5U4C1 1347 aa11.34□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Ythdc1E9Q5K9 736 aaKnown RBP11.34□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 PtmaP26350 111 aa11.34□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Rbm27Q5SFM8 1060 aaKnown RBP11.34□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Tmx3Q8BXZ1 456 aa11.34□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Bag4Q8CI61 457 aa11.34□□□□□ -0.59
Tnfrsf1b-201ENSMUST00000030336 Rasa1E9PYG6 1038 aa11.33□□□□□ -0.6
Tnfrsf1b-201ENSMUST00000030336 Ahdc1Q6PAL7 1594 aaKnown RBP11.33□□□□□ -0.6
Tnfrsf1b-201ENSMUST00000030336 HnrnpmQ9D0E1 729 aaKnown RBP11.33□□□□□ -0.6
Tnfrsf1b-201ENSMUST00000030336 Wdr63B2RY71 923 aa11.33□□□□□ -0.6
Tnfrsf1b-201ENSMUST00000030336 Rnf214Q8BFU3 668 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms