RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Rsph6aQ8CDR2 708 aa17.01■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Otud6bQ8K2H2 294 aa17.01■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Smtnl1Q99LM3 459 aa17.01■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Kcnj4P52189 445 aa17.01■□□□□ 0.31
Col7a1-201ENSMUST00000026740 LarsQ8BMJ2 1178 aa17.01■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ttll5Q8CHB8 1328 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 TnmdQ9EP64 317 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Olr1Q9EQ09 363 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 TbcaP48428 108 aaKnown RBP17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Erlin1Q91X78 346 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 PsapQ61207 557 aaKnown RBP17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Usp40Q8BWR4 1235 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Nf2P46662 596 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Larp1Q6ZQ58 1072 aaKnown RBP17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Sirt1Q923E4 737 aa17■□□□□ 0.31
Col7a1-201ENSMUST00000026740 PogkQ80TC5 607 aa16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Map3k7clP58500 142 aa16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Sin3aQ60520 1274 aaKnown RBP16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Nol7Q9D7Z3 254 aaKnown RBP16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Krt84Q99M73 603 aa16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Zscan10Q3URR7 782 aa16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ccdc181Q80ZU5 509 aa16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Q9D9S1 216 aa16.99■□□□□ 0.31
Col7a1-201ENSMUST00000026740 TefQ9JLC6 301 aa16.98■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ccdc183A2AJB1 534 aa16.98■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Plekhd1B2RPU2 505 aa16.98■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Cc2d1aQ8K1A6 943 aa16.97■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Krt85Q9Z2T6 507 aa16.97■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Cfdp1O88271 295 aaKnown RBP16.97■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Gm7361D3Z6R1 267 aa16.97■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Zpr1Q62384 459 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 4921530L21RikQ9CQ47 274 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ccdc191J3QQ27 883 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Lrrfip2Q91WK0 415 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Cfap58B2RW38 873 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ppp2r3aB2RXC8 1150 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ddx23D3Z0M9 819 aaKnown RBP16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Ccdc30Q8BVF4 654 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Tmx4Q8C0L0 335 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Riok1Q922Q2 567 aa16.96■□□□□ 0.31
Col7a1-201ENSMUST00000026740 Synj1Q8CHC4 1574 aa16.96■□□□□ 0.3
Col7a1-201ENSMUST00000026740 NinlQ6ZQ12 1394 aa16.96■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Stxbp4Q9WV89 557 aa16.96■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Sart1Q9Z315 806 aaKnown RBP16.96■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Cep57l1Q8VDS7 400 aa16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Stard3nlQ9DCI3 235 aa16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Inpp5dQ9ES52 1191 aa16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Atf3Q60765 181 aa16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Mical3Q8CJ19 1993 aa16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Gnai2P08752 355 aaKnown RBP16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Pafah1b1P63005 410 aaKnown RBP16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 SrrtQ99MR6 875 aaKnown RBP16.95■□□□□ 0.3
Col7a1-201ENSMUST00000026740 BbxQ8VBW5 907 aa16.94■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Noc2lQ9WV70 747 aaKnown RBP16.94■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Arhgap5P97393 1501 aa16.94■□□□□ 0.3
Col7a1-201ENSMUST00000026740 CenphQ9QYM8 241 aa16.94■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Cdc45Q9Z1X9 566 aa16.94■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Ccdc102aQ3TMW1 549 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Fam43aQ8BUP8 424 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Vps8Q0P5W1 1427 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Ccdc112A0AUP1 442 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Kcnh8P59111 1102 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Rab3gap2Q8BMG7 1366 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Washc4Q3UMB9 1173 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Smg7Q5RJH6 1138 aaKnown RBP16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Senp3Q9EP97 568 aaKnown RBP16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Pmfbp1Q9WVQ0 1022 aa16.93■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Prpf4bQ61136 1007 aaKnown RBP16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Map2k1P31938 393 aa16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Shq1Q7TMX5 569 aa16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Mphosph10Q810V0 681 aaKnown RBP16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Znf287Q9EQB9 759 aa16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 IkQ9Z1M8 557 aaKnown RBP16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Cetn1P41209 172 aa16.92■□□□□ 0.3
Col7a1-201ENSMUST00000026740 HypkQ9CR41 129 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Tspyl3Q3UYP3 334 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Homer1Q9Z2Y3 366 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Cavin4A2AMM0 362 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Gm10471E9Q1C7 252 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Ccdc172Q810N9 267 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Trim34bJ3QNR8 485 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Ccdc39Q9D5Y1 937 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Dydc1Q9D9T0 175 aa16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Eif5P59325 429 aaKnown RBP16.91■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Cc2d2bA0A286YDU8 1405 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Rapgef2Q8CHG7 1496 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 KarsQ99MN1 595 aaKnown RBP16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Zscan20B2KFW1 1030 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 FosbP13346 338 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Acbd3Q8BMP6 525 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Nek4Q9Z1J2 792 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Ctage5Q8R311 779 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Smc1aQ9CU62 1233 aaKnown RBP16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Sept6Q9R1T4 434 aa16.9■□□□□ 0.3
Col7a1-201ENSMUST00000026740 Gbp8Q2V6D6 525 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Fmnl2A2APV2 1086 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Lamb3Q61087 1168 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Rufy2Q8R4C2 606 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 Brms1Q99N20 246 aa16.89■□□□□ 0.29
Col7a1-201ENSMUST00000026740 BcanQ61361 883 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms