RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Gm16486A0A1D5RMD1 1434 aa24.29■■□□□ 1.48
Trim54-201ENSMUST00000013771 Col16a1Q8BLX7 1580 aa24.29■■□□□ 1.48
Trim54-201ENSMUST00000013771 Ltbp1Q8CG19 1712 aa24.28■■□□□ 1.48
Trim54-201ENSMUST00000013771 HdgfP51859 237 aaKnown RBP24.28■■□□□ 1.48
Trim54-201ENSMUST00000013771 Hspa5P20029 655 aaKnown RBP24.27■■□□□ 1.48
Trim54-201ENSMUST00000013771 PaskQ8CEE6 1383 aa24.27■■□□□ 1.48
Trim54-201ENSMUST00000013771 Neurod1Q60867 357 aa24.27■■□□□ 1.48
Trim54-201ENSMUST00000013771 Nphp4P59240 1425 aa24.26■■□□□ 1.47
Trim54-201ENSMUST00000013771 Zmym3Q9JLM4 1370 aa24.25■■□□□ 1.47
Trim54-201ENSMUST00000013771 NktrP30415 1453 aa24.25■■□□□ 1.47
Trim54-201ENSMUST00000013771 Robo1O89026 1612 aa24.24■■□□□ 1.47
Trim54-201ENSMUST00000013771 Gtf2e1Q9D0D5 440 aa24.24■■□□□ 1.47
Trim54-201ENSMUST00000013771 TimelessQ9R1X4 1197 aa24.24■■□□□ 1.47
Trim54-201ENSMUST00000013771 Dzip1Q8BMD2 852 aa24.22■■□□□ 1.47
Trim54-201ENSMUST00000013771 Bcl9lQ67FY2 1494 aa24.22■■□□□ 1.47
Trim54-201ENSMUST00000013771 CenpjQ569L8 1344 aa24.21■■□□□ 1.47
Trim54-201ENSMUST00000013771 Sbno1Q689Z5 1390 aa24.2■■□□□ 1.46
Trim54-201ENSMUST00000013771 Ccdc129Q14B48 1034 aa24.19■■□□□ 1.46
Trim54-201ENSMUST00000013771 Cacna1sQ02789 1880 aa24.18■■□□□ 1.46
Trim54-201ENSMUST00000013771 Kiaa0319Q5SZV5 1081 aa24.18■■□□□ 1.46
Trim54-201ENSMUST00000013771 Card11Q8CIS0 1159 aa24.18■■□□□ 1.46
Trim54-201ENSMUST00000013771 Mug2P28666 1451 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Nid2O88322 1403 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Ubap1lG3UW59 384 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Gsto1O09131 240 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Stard8Q8K031 1019 aa24.17■■□□□ 1.46
Trim54-201ENSMUST00000013771 Tet3Q8BG87 1668 aa24.16■■□□□ 1.46
Trim54-201ENSMUST00000013771 Adamtsl1Q8BLI0 1745 aa24.16■■□□□ 1.46
Trim54-201ENSMUST00000013771 Ncapd2Q8K2Z4 1392 aa24.15■■□□□ 1.46
Trim54-201ENSMUST00000013771 Mier1Q5UAK0 511 aa24.15■■□□□ 1.46
Trim54-201ENSMUST00000013771 Zbtb4Q5F293 982 aa24.13■■□□□ 1.45
Trim54-201ENSMUST00000013771 OscarQ8VBT3 265 aa24.13■■□□□ 1.45
Trim54-201ENSMUST00000013771 Idi2Q8BFZ6 227 aa24.12■■□□□ 1.45
Trim54-201ENSMUST00000013771 Frmpd2A0A140LI67 1392 aa24.12■■□□□ 1.45
Trim54-201ENSMUST00000013771 Srcin1Q9QWI6 1250 aa24.11■■□□□ 1.45
Trim54-201ENSMUST00000013771 Nup153E9Q3G8 1462 aaKnown RBP24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Gm21698A0A087WQP8 267 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 CatipB9EKE5 520 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Gm21671G3UY31 267 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Gimap6Q8K349 305 aa24.1■■□□□ 1.45
Trim54-201ENSMUST00000013771 Pard3Q99NH2 1333 aa24.09■■□□□ 1.45
Trim54-201ENSMUST00000013771 Ly75Q60767 1723 aa24.09■■□□□ 1.45
Trim54-201ENSMUST00000013771 FanciQ8K368 1330 aa24.07■■□□□ 1.44
Trim54-201ENSMUST00000013771 Fer1l6E0CZ42 1862 aa24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Pm20d1Q8C165 503 aa24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Exosc9Q9JHI7 438 aaKnown RBP24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Map3k19E9Q3S4 1311 aa24.06■■□□□ 1.44
Trim54-201ENSMUST00000013771 Taok3Q8BYC6 898 aa24.05■■□□□ 1.44
Trim54-201ENSMUST00000013771 VirmaA2AIV2 1811 aaKnown RBP24.03■■□□□ 1.44
Trim54-201ENSMUST00000013771 Zeb2Q9R0G7 1215 aa24.03■■□□□ 1.44
Trim54-201ENSMUST00000013771 NefmP08553 848 aa24.01■■□□□ 1.43
Trim54-201ENSMUST00000013771 Ppp6r1Q7TSI3 856 aa24.01■■□□□ 1.43
Trim54-201ENSMUST00000013771 Slx1bQ8BX32 270 aa24■■□□□ 1.43
Trim54-201ENSMUST00000013771 Ncoa4Q5U4H9 625 aa23.99■■□□□ 1.43
Trim54-201ENSMUST00000013771 Mast2Q60592 1734 aa23.99■■□□□ 1.43
Trim54-201ENSMUST00000013771 Znf335A2A5K6 1337 aa23.98■■□□□ 1.43
Trim54-201ENSMUST00000013771 TonslQ6NZL6 1363 aa23.98■■□□□ 1.43
Trim54-201ENSMUST00000013771 Kat6bQ8BRB7 1872 aa23.94■■□□□ 1.42
Trim54-201ENSMUST00000013771 Card10P58660 1021 aa23.93■■□□□ 1.42
Trim54-201ENSMUST00000013771 Gm21190A0A0G2JGJ6 266 aa23.93■■□□□ 1.42
Trim54-201ENSMUST00000013771 InsrP15208 1372 aa23.91■■□□□ 1.42
Trim54-201ENSMUST00000013771 Amotl2Q8K371 772 aa23.9■■□□□ 1.42
Trim54-201ENSMUST00000013771 Rock2P70336 1388 aa23.89■■□□□ 1.42
Trim54-201ENSMUST00000013771 Kif16bB1AVY7 1312 aa23.89■■□□□ 1.42
Trim54-201ENSMUST00000013771 4930523C07RikE9Q2T4 99 aa23.89■■□□□ 1.41
Trim54-201ENSMUST00000013771 Apba2P98084 750 aa23.89■■□□□ 1.41
Trim54-201ENSMUST00000013771 Cnga1P29974 684 aa23.88■■□□□ 1.41
Trim54-201ENSMUST00000013771 Rundc1Q0VDN7 615 aa23.88■■□□□ 1.41
Trim54-201ENSMUST00000013771 Dennd6aQ8BH65 605 aa23.87■■□□□ 1.41
Trim54-201ENSMUST00000013771 Kcnh5Q920E3 988 aa23.87■■□□□ 1.41
Trim54-201ENSMUST00000013771 Dnajc10Q9DC23 793 aa23.85■■□□□ 1.41
Trim54-201ENSMUST00000013771 TnrQ8BYI9 1358 aa23.85■■□□□ 1.41
Trim54-201ENSMUST00000013771 Nckap5lQ6GQX2 1323 aa23.83■■□□□ 1.41
Trim54-201ENSMUST00000013771 Nlgn1Q99K10 843 aa23.83■■□□□ 1.4
Trim54-201ENSMUST00000013771 Akap11E9Q777 1895 aa23.83■■□□□ 1.4
Trim54-201ENSMUST00000013771 Fmnl2A2APV2 1086 aa23.81■■□□□ 1.4
Trim54-201ENSMUST00000013771 Nwd2Q6P5U7 1742 aa23.81■■□□□ 1.4
Trim54-201ENSMUST00000013771 TatQ8QZR1 454 aa23.8■■□□□ 1.4
Trim54-201ENSMUST00000013771 RgmbQ7TQ33 436 aa23.79■■□□□ 1.4
Trim54-201ENSMUST00000013771 Cabp4Q8VHC5 271 aa23.79■■□□□ 1.4
Trim54-201ENSMUST00000013771 Vps33bP59016 617 aa23.78■■□□□ 1.4
Trim54-201ENSMUST00000013771 GakQ99KY4 1305 aa23.78■■□□□ 1.4
Trim54-201ENSMUST00000013771 Ezh2Q61188 746 aaKnown RBP23.77■■□□□ 1.4
Trim54-201ENSMUST00000013771 Ankrd23Q812A3 306 aa23.77■■□□□ 1.4
Trim54-201ENSMUST00000013771 Zcrb1Q9CZ96 217 aaKnown RBP23.77■■□□□ 1.4
Trim54-201ENSMUST00000013771 GalcP54818 684 aa23.76■■□□□ 1.39
Trim54-201ENSMUST00000013771 Uhrf1bp1lA2RSJ4 1457 aa23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Ddb1Q3U1J4 1140 aaKnown RBP23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Nol11Q8BJW5 723 aaKnown RBP23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Astn2Q80Z10 1352 aa23.75■■□□□ 1.39
Trim54-201ENSMUST00000013771 Pak3Q61036 559 aa23.74■■□□□ 1.39
Trim54-201ENSMUST00000013771 Mdc1Q5PSV9 1707 aa23.73■■□□□ 1.39
Trim54-201ENSMUST00000013771 Rab3gap2Q8BMG7 1366 aa23.73■■□□□ 1.39
Trim54-201ENSMUST00000013771 Lrit1Q8K099 624 aa23.73■■□□□ 1.39
Trim54-201ENSMUST00000013771 Vars2Q3U2A8 1060 aa23.71■■□□□ 1.39
Trim54-201ENSMUST00000013771 Ppfibp2O35711 882 aa23.7■■□□□ 1.38
Trim54-201ENSMUST00000013771 Cdk12Q14AX6 1484 aaKnown RBP23.7■■□□□ 1.38
Trim54-201ENSMUST00000013771 Chd4Q6PDQ2 1915 aaKnown RBP23.69■■□□□ 1.38
Trim54-201ENSMUST00000013771 Ginm1Q91WR6 327 aa23.69■■□□□ 1.38
Trim54-201ENSMUST00000013771 FancaQ9JL70 1439 aa23.68■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms