RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Ints3Q7TPD0 1041 aaKnown RBP16.9■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Psma5Q9Z2U1 241 aaKnown RBP16.9■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Smg7Q5RJH6 1138 aaKnown RBP16.89■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Ttc21bQ0HA38 1315 aa16.89■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Fchsd2Q3USJ8 740 aa16.89■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Nphp1Q9QY53 687 aa16.89■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Dusp9Q7TNL7 452 aa16.89■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Grin2aP35436 1464 aa16.89■□□□□ 0.29
Col1a1-201ENSMUST00000001547 IbtkQ6ZPR6 1352 aaKnown RBP16.89■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Cdc37l1Q9CZP7 335 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Gm21698A0A087WQP8 267 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Gm21671G3UY31 267 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 PsapQ61207 557 aaKnown RBP16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 HnrnpmQ9D0E1 729 aaKnown RBP16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Chrna2Q91X60 512 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 A0A0U1RNP2 1173 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Znhit6Q3UFB2 460 aaKnown RBP16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 1700010I14RikQ7TPG0 532 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Rufy1Q8BIJ7 712 aa16.88■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Ccdc43Q9CR29 222 aaKnown RBP16.87■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Nol12Q8BG17 217 aa16.87■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Gpatch3Q8BIY1 525 aa16.87■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Tnpo1Q8BFY9 898 aaKnown RBP16.87■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Gcc1Q9D4H2 778 aa16.86■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Usp48Q3V0C5 1052 aa16.86■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Pnmal2G3X9N3 661 aa16.86■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Rfx7F8VPJ6 1459 aa16.86■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Me1P06801 572 aa16.86■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Caskin1Q6P9K8 1431 aa16.85■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.85■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Dixdc1Q80Y83 711 aa16.85■□□□□ 0.29
Col1a1-201ENSMUST00000001547 AnlnQ8K298 1121 aaKnown RBP16.85■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Cfap99A0A140LIX9 648 aa16.84■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Stk11ipQ3TAA7 1072 aa16.84■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Hnrnpul1Q8VDM6 859 aaKnown RBP16.84■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Mlh3A0A1Y7VMP7 1443 aa16.84■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Hook1Q8BIL5 728 aa16.84■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Washc2Q6PGL7 1334 aa16.83■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Kif3aP28741 701 aa16.83■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Ggnbp2Q5SV77 696 aa16.83■□□□□ 0.29
Col1a1-201ENSMUST00000001547 Wdr78E9PYY5 807 aa16.83■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Kcnh8P59111 1102 aa16.83■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Hmgn5Q9JL35 406 aa16.83■□□□□ 0.28
Col1a1-201ENSMUST00000001547 UvssaQ9D479 717 aa16.82■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Sall3Q62255 1320 aa16.82■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Stard3nlQ9DCI3 235 aa16.82■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Sf3b2Q3UJB0 878 aaKnown RBP16.82■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Cog6Q8R3I3 657 aa16.82■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Anp32eP97822 260 aaKnown RBP16.81■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Cwc27Q3TKY6 469 aa16.81■□□□□ 0.28
Col1a1-201ENSMUST00000001547 TkfcQ8VC30 578 aa16.81■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Kif18aQ91WD7 886 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Polr3aB2RXC6 1390 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Rsph6aQ8CDR2 708 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Ankrd26Q811D2 1581 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Plekhd1B2RPU2 505 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Gcom1E9PZ54 550 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 MyzapQ3UIJ9 466 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Eif3aP23116 1344 aaKnown RBP16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Speer4bQ9D9F7 267 aa16.8■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Srgap3Q812A2 1099 aa16.79■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Ddx54Q8K4L0 874 aaKnown RBP16.79■□□□□ 0.28
Col1a1-201ENSMUST00000001547 OptnQ8K3K8 584 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 MvpQ9EQK5 861 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Ccdc173A0JLY1 547 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Map4k4P97820 1233 aaKnown RBP16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 TmpoQ61033 693 aaKnown RBP16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Paf1Q8K2T8 535 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Ubxn4Q8VCH8 506 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 GphnQ8BUV3 769 aaKnown RBP16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Trim29Q8R2Q0 587 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Slx4Q6P1D7 1565 aa16.78■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Gm21663A0A0G2JE01 267 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Gm7361D3Z6R1 267 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 5031410I06RikE9Q4E0 267 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Gm1979E9QAN3 267 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Gm5862K7N5V5 267 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Gm10220K7N660 267 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Hap1O35668 628 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Q9D9S1 216 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Abl1P00520 1123 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Agtpbp1Q641K1 1218 aa16.77■□□□□ 0.28
Col1a1-201ENSMUST00000001547 Nol8Q3UHX0 1147 aaKnown RBP16.77■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Sytl4Q9R0Q1 673 aa16.77■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Exoc6bA6H5Z3 810 aa16.77■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Odf2lQ9D478 642 aa16.77■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Gm1043A0A140LJC2 1431 aa16.76■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Gtf2f1Q3THK3 508 aaKnown RBP16.76■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Rnf214Q8BFU3 668 aaKnown RBP16.76■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Zkscan1Q8BGS3 561 aaKnown RBP16.76■□□□□ 0.27
Col1a1-201ENSMUST00000001547 March6Q6ZQ89 909 aa16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Btbd11Q6GQW0 1109 aa16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Maco1Q7TQE6 664 aaKnown RBP16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Gm21680A0A0G2JGR8 267 aa16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Ppp1r15aP17564 657 aa16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 CarsQ9ER72 831 aaKnown RBP16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 4930572O03RikQ8C5Y0 211 aa16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Rbm5Q91YE7 815 aaKnown RBP16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Hdgfl1Q2VPR5 283 aa16.75■□□□□ 0.27
Col1a1-201ENSMUST00000001547 Rbm28Q8CGC6 750 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms