RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SNX25Q9H3E2 840 aa12.15□□□□□ -0.47
RBFOX1-224ENST00000641259 SMARCAD1Q9H4L7 1026 aa12.15□□□□□ -0.47
RBFOX1-224ENST00000641259 SIAEQ9HAT2 523 aa12.15□□□□□ -0.47
RBFOX1-224ENST00000641259 VTA1Q9NP79 307 aa12.15□□□□□ -0.47
RBFOX1-224ENST00000641259 CDC14AQ9UNH5 594 aa12.15□□□□□ -0.47
RBFOX1-224ENST00000641259 PDLIM1O00151 329 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 ENO2P09104 434 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 MYCLP1P12525 358 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 INSRRP14616 1297 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 S100A1P23297 94 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 DNASE1L3Q13609 305 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 TDRD10Q5VZ19 366 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 EFCAB12Q6NXP0 572 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 C15orf39Q6ZRI6 1047 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 BHLHE22Q8NFJ8 381 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 HTRA1Q92743 480 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 AZIN2Q96A70 460 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 VPS50Q96JG6 964 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CCDC138Q96M89 665 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 NSMCE3Q96MG7 304 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 SH3GL1Q99961 368 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 RPL26L1Q9UNX3 145 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 PCDHGA3Q9Y5H0 932 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 MSLNQ13421 630 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 KRT39Q6A163 491 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 SPOPLQ6IQ16 392 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM47BQ8NA70 645 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM167AQ96KS9 214 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CITED4Q96RK1 184 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 VPS11Q9H270 941 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 POLE4Q9NR33 117 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 PIH1D1Q9NWS0 290 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 DKK3Q9UBP4 350 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 PCSK1NQ9UHG2 260 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 COQ4Q9Y3A0 265 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 A0A1W2PQ67 120 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 VNN1O95497 513 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CLDN10P78369 228 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 OCA2Q04671 838 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 MORN1Q5T089 497 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CROCCP3Q8IVE0 287 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 PLEKHA8Q96JA3 519 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 MSTO1Q9BUK6 570 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CCDC68Q9H2F9 335 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 ADNPQ9H2P0 1102 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 POMPQ9Y244 141 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CARD8Q9Y2G2 431 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 CNTNAP2Q9UHC6 1331 aa12.14□□□□□ -0.47
RBFOX1-224ENST00000641259 ANKRD12Q6UB98 2062 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 GOLGA8TH3BQL2 631 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 ADAM23O75077 832 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 THRAP10827 490 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 LAMC2Q13753 1193 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 KCNT1Q5JUK3 1230 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 IER5Q5VY09 327 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CLIP4Q8N3C7 705 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 OR5B17Q8NGF7 314 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 SLC35B4Q969S0 331 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 TMEM134Q9H6X4 195 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CROCCQ5TZA2 2017 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 SH3PXD2BA1X283 911 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 GABBR2O75899 941 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CLIC3O95833 236 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 TRPC1P48995 793 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 MARCH8Q5T0T0 291 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 TMEM192Q8IY95 271 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 HACE1Q8IYU2 909 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CALML6Q8TD86 181 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 EMID1Q96A84 441 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CIB1Q99828 191 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 POLR1BQ9H9Y6 1135 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 RBAKQ9NYW8 714 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 KANSL3Q9P2N6 904 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 H7C0C1 242 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 ATP9BO43861 1147 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 KRT37O76014 449 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 HSPA4LO95757 839 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 DLGAP3O95886 979 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 VTNP04004 478 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 JAK1P23458 1154 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 YAP1P46937 504 aaKnown RBP12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 ATP5OP48047 213 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 GPC3P51654 580 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 SULT2A1Q06520 285 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 CCDC153Q494R4 210 aa12.13□□□□□ -0.47
RBFOX1-224ENST00000641259 LGSNQ5TDP6 509 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms