RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GRIK1P39086 918 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 MNAT1P51948 309 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 SLC5A3P53794 718 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 YWHAHQ04917 246 aaPredicted RBP22.04■■□□□ 1.12
CLN6-224ENST00000638076 TEX44Q53QW1 395 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 TRIM62Q9BVG3 475 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 SIK2Q9H0K1 926 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 GBA3Q9H227 469 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 PSAT1Q9Y617 370 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 COL4A4P53420 1690 aaPredicted RBP22.04■■□□□ 1.12
CLN6-224ENST00000638076 ARHGEF37A1IGU5 675 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 B4GALT3O60512 393 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 TOP3BO95985 862 aaKnown RBP22.03■■□□□ 1.12
CLN6-224ENST00000638076 ALDH1A1P00352 501 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 OR4Q2P0C623 313 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 RWDD4Q6NW29 188 aaKnown RBP22.03■■□□□ 1.12
CLN6-224ENST00000638076 MTDHQ86UE4 582 aaKnown RBP22.03■■□□□ 1.12
CLN6-224ENST00000638076 OSBPL2Q9H1P3 480 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 ZFP69BQ9UJL9 534 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 TRHDEQ9UKU6 1024 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 TGDSO95455 350 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 KRT16P08779 473 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 ERVK-10P10266 1014 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 ACLYP53396 1101 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 EIF4EBP2Q13542 120 aaPredicted RBP22.03■■□□□ 1.12
CLN6-224ENST00000638076 TAF1BQ53T94 588 aaPredicted RBP22.03■■□□□ 1.12
CLN6-224ENST00000638076 BTBD8Q5XKL5 378 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 BEND5Q7L4P6 421 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 RNF180Q86T96 592 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 RASSF3Q86WH2 238 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 ZNF280BQ86YH2 543 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 DNAAF3Q8N9W5 541 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 ZFATQ9P243 1243 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 VANGL2Q9ULK5 521 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 SQORQ9Y6N5 450 aa22.03■■□□□ 1.12
CLN6-224ENST00000638076 IRAK2O43187 625 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 ATP5HO75947 161 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 ATP6V1G2O95670 118 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 CKBP12277 381 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 NFKB1P19838 968 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 PGFP49763 221 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 KCTD11Q693B1 232 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 C4orf50Q6ZRC1 276 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 RTN4RL1Q86UN2 441 aaPredicted RBP22.02■■□□□ 1.12
CLN6-224ENST00000638076 STKLD1Q8NE28 680 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 MLPHQ9BV36 600 aaPredicted RBP22.02■■□□□ 1.12
CLN6-224ENST00000638076 KCNK13Q9HB14 408 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 RGS18Q9NS28 235 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 ABCC13Q9NSE7 274 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 ARHGEF38Q9NXL2 777 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 HAO1Q9UJM8 370 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 PCDHB8Q9UN66 801 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 INPPL1O15357 1258 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 DDHD2O94830 711 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 IL1BP01584 269 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 ALDOAP04075 364 aaKnown RBP22.02■■□□□ 1.12
CLN6-224ENST00000638076 ARFIP2P53365 341 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 NAB1Q13506 487 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 SPANXN3Q5MJ09 141 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 ITPRIPL1Q6GPH6 555 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 NUDCD3Q8IVD9 361 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 TRIM42Q8IWZ5 723 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 E2F7Q96AV8 911 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 CERS2Q96G23 380 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 FCRL3Q96P31 734 aaPredicted RBP22.02■■□□□ 1.12
CLN6-224ENST00000638076 VAT1Q99536 393 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 LRRC40Q9H9A6 602 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 CD248Q9HCU0 757 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 CASS4Q9NQ75 786 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 BFARQ9NZS9 450 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 SFMBT1Q9UHJ3 866 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 STK38LQ9Y2H1 464 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 NUMBLQ9Y6R0 609 aa22.02■■□□□ 1.12
CLN6-224ENST00000638076 TNFRSF10BO14763 440 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 JCHAINP01591 159 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 TMPRSS15P98073 1019 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 CHI3L2Q15782 390 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 SLC39A12Q504Y0 691 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 GLB1LQ6UWU2 654 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 TEKT5Q96M29 485 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 SIRPGQ9P1W8 387 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 BAIAP2L1Q9UHR4 511 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 CCDC195A0A1B0GUA6 201 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 ARHGAP42A6NI28 874 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 ERI2A8K979 691 aaKnown RBP22.01■■□□□ 1.11
CLN6-224ENST00000638076 TPP1O14773 563 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 MSI1O43347 362 aaKnown RBP22.01■■□□□ 1.11
CLN6-224ENST00000638076 CABYRO75952 493 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 ITGA2BP08514 1039 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 DLDP09622 509 aaKnown RBP22.01■■□□□ 1.11
CLN6-224ENST00000638076 CYP2C18P33260 490 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 BST1Q10588 318 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 ATG16L1Q676U5 607 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 ZNF449Q6P9G9 518 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 DPF3Q92784 378 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 TMEM237Q96Q45 408 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 TXNDC16Q9P2K2 825 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 NEU3Q9UQ49 428 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 NLRC5Q86WI3 1866 aa22.01■■□□□ 1.11
CLN6-224ENST00000638076 NUP205Q92621 2012 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms