RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 VWA3BQ502W6 1294 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 BEND6Q5SZJ8 279 aaPredicted RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 SPATA2LQ8IUW3 424 aaPredicted RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 TMEFF1Q8IYR6 380 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 SPPL2BQ8TCT7 592 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 SH3RF2Q8TEC5 729 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 HMGB4Q8WW32 186 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 TTC9Q92623 222 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 MMS19Q96T76 1030 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 NTPCRQ9BSD7 190 aaKnown RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 DHRS4Q9BTZ2 278 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 LRRC27Q9C0I9 530 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 ECT2Q9H8V3 914 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 NHEJ1Q9H9Q4 299 aaPredicted RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 FSCN3Q9NQT6 498 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 VPS45Q9NRW7 570 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 DDX43Q9NXZ2 648 aaKnown RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 KCNG1Q9UIX4 513 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 MYO6Q9UM54 1294 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 MYOFQ9NZM1 2061 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 ANO9A1A5B4 782 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 FRMD3A2A2Y4 597 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 EPHB6O15197 1021 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 APBB3O95704 486 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 FGF19O95750 216 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CSH1P0DML2 217 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CSH2P0DML3 217 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 TRIM21P19474 475 aaKnown RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CYP3A5P20815 502 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CYLC1P35663 651 aaPredicted RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CCNFP41002 786 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CYP27A1Q02318 531 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 ZBTB6Q15916 424 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 SEPT7Q16181 437 aaKnown RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 USP39Q53GS9 565 aaKnown RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM196Q5HYL7 178 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 SLC39A4Q6P5W5 647 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 UNQ6494/PRO21346Q6UXR6 183 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 RIPOR1Q6ZS17 1223 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CPA6Q8N4T0 437 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 FRMD1Q8N878 549 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 CD101Q93033 1021 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 JAKMIP2Q96AA8 810 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 MSANTD3Q96H12 275 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 FAM83CQ9BQN1 747 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 LACRTQ9GZZ8 138 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 DUSP15Q9H1R2 295 aaPredicted RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 GEMIN8Q9NWZ8 242 aaKnown RBP5.08□□□□□ -1.6
LINC00550-201ENST00000629293 FRRS1LQ9P0K9 344 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 NOTCH2Q04721 2471 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 THADAQ6YHU6 1953 aa5.08□□□□□ -1.6
LINC00550-201ENST00000629293 PATJQ8NI35 1801 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TRAV19A0A0A6YYK7 116 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 A0A0B4J269 797 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CTAGE15A4D2H0 777 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 C2orf78A6NCI8 922 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SHOXO15266 292 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ATP2C2O75185 946 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SMNDC1O75940 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 RHOBTB1O94844 696 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 UBOX5O94941 541 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 GCNT3O95395 438 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CTAGE8P0CG41 777 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 HAPLN1P10915 354 aaPredicted RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 BCKDHBP21953 392 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 AARSP49588 968 aaKnown RBP eCLIP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 VAV2P52735 878 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SIM1P81133 766 aaPredicted RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 KDSRQ06136 332 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 FKBP15Q5T1M5 1219 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 WDR93Q6P2C0 686 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CTAGE6Q86UF2 777 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SFR1Q86XK3 245 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CTAGE4Q8IX94 777 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 NAT16Q8N8M0 369 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 NOA1Q8NC60 698 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SCNM1Q9BWG6 230 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 LSM14BQ9BX40 385 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 EDEM3Q9BZQ6 932 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ZCWPW1Q9H0M4 648 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 NDST4Q9H3R1 872 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 KRT82Q9NSB4 513 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CPSF3Q9UKF6 684 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 DSEQ9UL01 958 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF462Q96JM2 2506 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 MYH11P35749 1972 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SPAARA0A1B0GVQ0 90 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 HYAL3O43820 417 aaPredicted RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 EPN2O95208 641 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 FGFR1OPO95684 399 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ATP1A1P05023 1023 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TUBBP07437 444 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM191BP0C7N4 346 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 HMGA1P17096 107 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 DRD1P21728 446 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 GRIK1P39086 918 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 NCKAP1LP55160 1127 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 MYL7Q01449 175 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ASTE1Q2TB18 679 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms