RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 RIMS3Q9UJD0 308 aa13.36□□□□□ -0.27
CHD1L-210ENST00000622533 RLFQ13129 1914 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 E2F8A0AVK6 867 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 CFLARO15519 480 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 APRTP07741 180 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 XRCC1P18887 633 aaPredicted RBP13.35□□□□□ -0.27
CHD1L-210ENST00000622533 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
CHD1L-210ENST00000622533 MAGEA3P43357 314 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 CDK9P50750 372 aaKnown RBP13.35□□□□□ -0.27
CHD1L-210ENST00000622533 SLC9A4Q6AI14 798 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 CATSPERGQ6ZRH7 1159 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 AGR3Q8TD06 166 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 RXFP2Q8WXD0 754 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 USP13Q92995 863 aaPredicted RBP13.35□□□□□ -0.27
CHD1L-210ENST00000622533 ATP2A3Q93084 1043 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 OSBPL6Q9BZF3 934 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 PLAC1Q9HBJ0 212 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 PTPRHQ9HD43 1115 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 EBF1Q9UH73 591 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 RNF11Q9Y3C5 154 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 NOP56O00567 594 aaKnown RBP13.35□□□□□ -0.27
CHD1L-210ENST00000622533 DPYSL4O14531 572 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 DGKIO75912 1065 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 GSRP00390 522 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 TGFB3P10600 412 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 MYL4P12829 197 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 CD151P48509 253 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 THOP1P52888 689 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 SLC5A3P53794 718 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 PFKPQ01813 784 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 FLOT2Q14254 428 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 STILQ15468 1287 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 TMEM53Q6P2H8 277 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 UNC5AQ6ZN44 842 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 ALDH16A1Q8IZ83 802 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 PPP1R36Q96LQ0 422 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 ZNF670Q9BS34 389 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 SLC17A6Q9P2U8 582 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 ARHGAP26Q9UNA1 814 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
CHD1L-210ENST00000622533 FBP2O00757 339 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 FGF3P11487 239 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 PTPRAP18433 802 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 RBL1P28749 1068 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 EPHA3P29320 983 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 SERPINB5P36952 375 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 GJA8P48165 433 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 NUDT2P50583 147 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 NDST2P52849 883 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 HMGCS2P54868 508 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 ZNF280AP59817 542 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 TGFBIQ15582 683 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 CCDC92Q53HC0 331 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 DEPDC1BQ8WUY9 529 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 CDRT15Q96T59 188 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 PAIP1Q9H074 479 aaKnown RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 ZNF112Q9UJU3 913 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 GCATO75600 419 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 MAP3K6O95382 1288 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 PSMC3P17980 439 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 SNX16P57768 344 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 MS4A2Q01362 244 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 NAB1Q13506 487 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 OR6B2Q6IFH4 312 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 TICAM1Q8IUC6 712 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 CROCCP3Q8IVE0 287 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 BHLHE22Q8NFJ8 381 aaPredicted RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 NLRP7Q8WX94 980 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 HEXIM2Q96MH2 286 aaKnown RBP13.34□□□□□ -0.27
CHD1L-210ENST00000622533 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 ELOVL4Q9GZR5 314 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 BRD8Q9H0E9 1235 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 FZD8Q9H461 694 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 CROCCQ5TZA2 2017 aa13.34□□□□□ -0.27
CHD1L-210ENST00000622533 MDM4O15151 490 aa13.33□□□□□ -0.27
CHD1L-210ENST00000622533 ADAM23O75077 832 aa13.33□□□□□ -0.27
CHD1L-210ENST00000622533 E2F6O75461 281 aa13.33□□□□□ -0.27
CHD1L-210ENST00000622533 TCN1P20061 433 aaPredicted RBP13.33□□□□□ -0.27
CHD1L-210ENST00000622533 CDH8P55286 799 aa13.33□□□□□ -0.27
CHD1L-210ENST00000622533 PTAR1Q7Z6K3 402 aaPredicted RBP13.33□□□□□ -0.27
CHD1L-210ENST00000622533 DQX1Q8TE96 717 aaKnown RBP13.33□□□□□ -0.27
CHD1L-210ENST00000622533 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.27
CHD1L-210ENST00000622533 TNFSF13BQ9Y275 285 aa13.33□□□□□ -0.27
CHD1L-210ENST00000622533 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.28
CHD1L-210ENST00000622533 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
CHD1L-210ENST00000622533 STX16-NPEPL1H3BU86 382 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms