RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 INSL6Q9Y581 213 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 BTAF1O14981 1849 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 HNRNPCL1O60812 293 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SUPT7LO94864 414 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 GP5P40197 560 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 RAP1GDS1P52306 607 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SLC5A3P53794 718 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SULT2A1Q06520 285 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 NAB1Q13506 487 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 DPYSL3Q14195 570 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CHI3L2Q15782 390 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PTPN20Q4JDL3 420 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ZNF662Q6ZS27 426 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 BBS12Q6ZW61 710 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 KCNMB4Q86W47 210 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 TEKT4Q8WW24 435 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ZBED3Q96IU2 234 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 FCRL2Q96LA5 508 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PANX3Q96QZ0 392 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 TEX12Q9BXU0 123 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 UTP6Q9NYH9 597 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 GMIPQ9P107 970 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CFAP97Q9P2B7 532 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 NAALADL1Q9UQQ1 740 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SPACA6W5XKT8 324 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 GLI3P10071 1580 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 KRT16P08779 473 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PTPN3P26045 913 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PEX19P40855 299 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 RAD23BP54727 409 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 HNRNPH2P55795 449 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SETMARQ53H47 684 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 C6orf10Q5SRN2 563 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM46CQ5VWP2 391 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CPA6Q8N4T0 437 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CXorf40AQ8TE69 158 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 TMEM175Q9BSA9 504 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 KIAA1522Q9P206 1035 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SFMBT1Q9UHJ3 866 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 NUP98P52948 1817 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CCL16O15467 120 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ZW10O43264 779 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 DDHD2O94830 711 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 KLHL2O95198 593 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ERCC2P18074 760 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ALDH18A1P54886 795 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 RPL7AP62424 266 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CUL3Q13618 768 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 SGO1Q5FBB7 561 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 GRTP1Q5TC63 336 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 STK40Q8N2I9 435 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 PPP1R36Q96LQ0 422 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 ILKAPQ9H0C8 392 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 CTNNAL1Q9UBT7 734 aa9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 MARCOQ9UEW3 520 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 MTO1Q9Y2Z2 717 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-208ENST00000615606 A0A0U1RQF3 1178 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 TMEM191CA6NGB0 347 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PPFIA2O75334 1257 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 CLDN11O75508 207 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MPOP05164 745 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 CCNB1P14635 433 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PTPN2P17706 415 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PDE1CQ14123 709 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PLCL1Q15111 1095 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MPPE1Q53F39 396 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 C1orf146Q5VVC0 180 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PCYOX1LQ8NBM8 494 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 HIPK4Q8NE63 616 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 FUBP3Q96I24 572 aaKnown RBP eCLIP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 RIPOR3Q96MK2 946 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM111AQ96PZ2 611 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 BRD9Q9H8M2 597 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 CHST7Q9NS84 486 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 ETNK2Q9NVF9 386 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 WDR27A2RRH5 827 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PDZK1P1A8MUH7 402 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 CHADO15335 359 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 TBC1D4O60343 1298 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 NFATC1O95644 943 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PECAM1P16284 738 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 CYP2A7P20853 494 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 ATXN3P54252 364 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PPP2R2DQ66LE6 453 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 SETD3Q86TU7 594 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 DAW1Q8N136 415 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PNKPQ96T60 521 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MLPHQ9BV36 600 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 TAS2R13Q9NYV9 303 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 C5orf58C9J3I9 102 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 ATG7O95352 703 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 RPN2P04844 631 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms