RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 DDX42Q86XP3 938 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS11-206ENST00000614944 FNIP1Q8TF40 1166 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TNIP3Q96KP6 325 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SUSD3Q96L08 255 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 MRPL47Q9HD33 250 aaKnown RBP9.04□□□□□ -0.96
VPS11-206ENST00000614944 DDX18Q9NVP1 670 aaKnown RBP9.04□□□□□ -0.96
VPS11-206ENST00000614944 CLIC5Q9NZA1 410 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 PCDHB8Q9UN66 801 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TTC3P53804 2025 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TIMP1P01033 207 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 ERBB2P04626 1255 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SLC1A1P43005 524 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 NR2C2P49116 596 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 BCAP31P51572 246 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 LBX1P52954 281 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 ANO4Q32M45 955 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TRIM60Q495X7 471 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 NOMO2Q5JPE7 1267 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 LIN9Q5TKA1 542 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 PRR23CQ6ZRP0 262 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 COLGALT2Q8IYK4 626 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 LZTR1Q8N653 840 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 NIPA2Q8N8Q9 360 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 NEURL2Q9BR09 285 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 CXCL16Q9H2A7 254 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 MIOSQ9NXC5 875 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SPEF1Q9Y4P9 236 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SAR1BQ9Y6B6 198 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SCN5AQ14524 2016 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SIGLEC16A6NMB1 481 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 THAP12O43422 761 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TCP1P17987 556 aaKnown RBP9.04□□□□□ -0.96
VPS11-206ENST00000614944 CTNNA2P26232 953 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 HSD17B7P56937 341 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TOMM20Q15388 145 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 CCDC6Q16204 474 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SGO2Q562F6 1265 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 SCARA3Q6AZY7 606 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 PASD1Q8IV76 773 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
VPS11-206ENST00000614944 TBC1D20Q96BZ9 403 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 GAD1Q99259 594 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 CTRCQ99895 268 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 ZSWIM1Q9BR11 485 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 KLHL3Q9UH77 587 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 CDH9Q9ULB4 789 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 GUCA1BQ9UMX6 200 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 MIF4GDA9UHW6 222 aaKnown RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 SYN3O14994 580 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 HUS1O60921 280 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 NDST1P52848 882 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 IST1P53990 364 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TLE2Q04725 743 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TGFBIQ15582 683 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 MOGQ16653 247 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PHKG1Q16816 387 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 KLHL38Q2WGJ6 581 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CLLU1OSQ5K130 101 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 LILRB4Q8NHJ6 448 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CFAP61Q8NHU2 1237 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CASD1Q96PB1 797 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 SALL4Q9UJQ4 1053 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PCDHGA8Q9Y5G5 932 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 GRID2IPA4D2P6 1211 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ODC1P11926 461 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 RCVRNP35243 200 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 HSD17B2P37059 387 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TSPY1Q01534 308 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PLCB3Q01970 1234 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 NFE2L1Q14494 772 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TTC39BQ5VTQ0 682 aaPredicted RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 USP43Q70EL4 1123 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CDC26Q8NHZ8 85 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 SLC22A8Q8TCC7 542 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 KCTD13Q8WZ19 329 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ARHGEF2Q92974 986 aaKnown RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 VWCEQ96DN2 955 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 HES6Q96HZ4 224 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 DHRS9Q9BPW9 319 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TMEM106CQ9BVX2 250 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PACSIN1Q9BY11 444 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PNPLA8Q9NP80 782 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ASNSD1Q9NWL6 643 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 GIN1Q9NXP7 522 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PCDHGA3Q9Y5H0 932 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 A0A0U1RQJ8 604 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 A8MX80 341 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 MYZAPP0CAP1 466 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ADSLP30566 484 aaPredicted RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 CDK18Q07002 472 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 SMARCB1Q12824 385 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ASRGL1Q7L266 308 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ADGRF2Q8IZF7 708 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 WDTC1Q8N5D0 677 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 SLC35G2Q8TBE7 412 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 LRRC8CQ8TDW0 803 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TFAP2BQ92481 460 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms