RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 DUPD1Q68J44 220 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 HIST2H2AA3Q6FI13 130 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 C11orf88Q6PI97 169 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 FAM118BQ9BPY3 351 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TINF2Q9BSI4 451 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 EMILIN2Q9BXX0 1053 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 LRRC4BQ9NT99 713 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 BARX2Q9UMQ3 279 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TBX20Q9UMR3 447 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 NDUFAF1Q9Y375 327 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ATMINO43313 823 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 DCXO43602 365 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 IFNA14P01570 189 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TCF3P15923 654 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 AKAP5P24588 427 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 AXLP30530 894 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 VAC14Q08AM6 782 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ST3GAL1Q11201 340 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 RFX4Q33E94 735 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 OTUD3Q5T2D3 398 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ADHFE1Q8IWW8 467 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MYDGFQ969H8 173 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 AGAP3Q96P47 875 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 GANQ9H2C0 597 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 LRRC40Q9H9A6 602 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 RUVBL2Q9Y230 463 aaKnown RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 CHKBQ9Y259 395 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 RBM47A0AV96 593 aaKnown RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 RGSL1A5PLK6 1076 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 NCAM2O15394 837 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 HS6ST1O60243 411 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TGDSO95455 350 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ADSLP30566 484 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PPIL2Q13356 520 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ACAP2Q15057 778 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 GLRA4Q5JXX5 417 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SPDYAQ5MJ70 313 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 EIF3MQ7L2H7 374 aaKnown RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SATL1Q86VE3 508 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 DENND2DQ9H6A0 471 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 AVENQ9NQS1 362 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 POLIQ9UNA4 740 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 DUSP12Q9UNI6 340 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 DOLKQ9UPQ8 538 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PCDHGA10Q9Y5H3 936 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ADGRA2Q96PE1 1338 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ADAMTS13Q76LX8 1427 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PTGES3LE9PB15 166 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PRPF4O43172 522 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SREBF1P36956 1147 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ACLYP53396 1101 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PHC1P78364 1004 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MGAT5Q09328 741 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 GALNT18Q6P9A2 607 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SPOCD1Q6ZMY3 1216 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 CLNKQ7Z7G1 428 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 LEMD2Q8NC56 503 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MRPL48Q96GC5 212 aaKnown RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 L3MBTL3Q96JM7 780 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SLITRK1Q96PX8 696 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 RTKNQ9BST9 563 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF224Q9NZL3 707 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TRMT6Q9UJA5 497 aaKnown RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 C3orf18Q9UK00 162 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TMCC3Q9ULS5 477 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 KIF1AQ12756 1690 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 KRT87PA6NCN2 255 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 TMEM114B3SHH9 223 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 F5H423 210 aaPredicted RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 ANXA6P08133 673 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 ENO2P09104 434 aaPredicted RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 GNL1P36915 607 aaPredicted RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 PTGER2P43116 358 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 LHX1P48742 406 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 SLC11A2P49281 568 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 NME5P56597 212 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 ELAVL2Q12926 359 aaKnown RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 FRG1Q14331 258 aaKnown RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 TNFAIP8L3Q5GJ75 292 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 EFCAB12Q6NXP0 572 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 KIAA0408Q6ZU52 694 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 AP3S1Q92572 193 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 ITPKCQ96DU7 683 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 PPP1R10Q96QC0 940 aaKnown RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 CGRRF1Q99675 332 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 SPON2Q9BUD6 331 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 OSBPL10Q9BXB5 764 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 EPB41L1Q9H4G0 881 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7□□□□□ -1.29
CLCN3-211ENST00000613795 GSTK1Q9Y2Q3 226 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 SNX9Q9Y5X1 595 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 SF3B1O75533 1304 aaKnown RBP eCLIP7□□□□□ -1.299e-6■■■■■ 68.9
CLCN3-211ENST00000613795 CCDC189A1A4V9 331 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 TFRCP02786 760 aaKnown RBP7□□□□□ -1.29
CLCN3-211ENST00000613795 DNAJB2P25686 324 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 AKT1P31749 480 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 CUL2Q13617 745 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 GOLGA7BQ2TAP0 167 aa7□□□□□ -1.29
CLCN3-211ENST00000613795 SH3BP5LQ7L8J4 393 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms