RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TCAF2A6NFQ2 919 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 SIN3BO75182 1162 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 CYP11B1P15538 503 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 KCNMA1Q12791 1236 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 NME3Q13232 169 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 HNRNPDQ14103 355 aaKnown RBP17.92■□□□□ 0.46
PRKN-209ENST00000612485 TCP11X2Q5H9J9 407 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 USP30Q70CQ3 517 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 DHX40Q8IX18 779 aaKnown RBP17.92■□□□□ 0.46
PRKN-209ENST00000612485 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
PRKN-209ENST00000612485 SNX19Q92543 992 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 PPP1R9BQ96SB3 815 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 MTG2Q9H4K7 406 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 C6orf106Q9H6K1 298 aaPredicted RBP17.92■□□□□ 0.46
PRKN-209ENST00000612485 PLCB1Q9NQ66 1216 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 LMBRD1Q9NUN5 540 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 FHOD1Q9Y613 1164 aa17.92■□□□□ 0.46
PRKN-209ENST00000612485 CACNA1EQ15878 2313 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 EDDM13A0A1B0GTR0 161 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 M0QYT0 321 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 CD59P13987 128 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 CDH5P33151 784 aaPredicted RBP17.91■□□□□ 0.46
PRKN-209ENST00000612485 NNMTP40261 264 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 MATKP42679 507 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 CTSOP43234 321 aaPredicted RBP17.91■□□□□ 0.46
PRKN-209ENST00000612485 SULT2A1Q06520 285 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 FBXL22Q6P050 247 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 IL27RAQ6UWB1 636 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 APCDD1Q8J025 514 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 ENOX1Q8TC92 643 aaKnown RBP17.91■□□□□ 0.46
PRKN-209ENST00000612485 GANCQ8TET4 914 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 RPRD1AQ96P16 312 aaPredicted RBP17.91■□□□□ 0.46
PRKN-209ENST00000612485 PABPC3Q9H361 631 aaKnown RBP17.91■□□□□ 0.46
PRKN-209ENST00000612485 TMEM51Q9NW97 253 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 STAP1Q9ULZ2 295 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.91■□□□□ 0.46
PRKN-209ENST00000612485 ITIH6Q6UXX5 1313 aa17.91■□□□□ 0.46
PRKN-209ENST00000612485 TTC34A8MYJ7 566 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 GJB3O75712 270 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 CER1O95813 267 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 TPM2P07951 284 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 UCHL3P15374 230 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 PDGFRAP16234 1089 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 AFF3P51826 1226 aaKnown RBP17.9■□□□□ 0.46
PRKN-209ENST00000612485 PLK1P53350 603 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 AUHQ13825 339 aaKnown RBP17.9■□□□□ 0.46
PRKN-209ENST00000612485 ST3GAL2Q16842 350 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 C9orf64Q5T6V5 341 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 CIR1Q86X95 450 aaPredicted RBP17.9■□□□□ 0.46
PRKN-209ENST00000612485 MSANTD4Q8NCY6 345 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 C1orf216Q8TAB5 229 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 C18orf8Q96DM3 657 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 NAA15Q9BXJ9 866 aaKnown RBP17.9■□□□□ 0.46
PRKN-209ENST00000612485 STK33Q9BYT3 514 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 OSGEPQ9NPF4 335 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 FBXL12Q9NXK8 326 aa17.9■□□□□ 0.46
PRKN-209ENST00000612485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRKN-209ENST00000612485 SPAARA0A1B0GVQ0 90 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 FSBPO95073 299 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 LSM8O95777 96 aaKnown RBP17.89■□□□□ 0.45
PRKN-209ENST00000612485 RDXP35241 583 aaKnown RBP17.89■□□□□ 0.45
PRKN-209ENST00000612485 SCNN1AP37088 669 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 GABRB2P47870 512 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 SIM1P81133 766 aaPredicted RBP17.89■□□□□ 0.45
PRKN-209ENST00000612485 TEAD4Q15561 434 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 CST6Q15828 149 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 BRMS1LQ5PSV4 323 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 TAF3Q5VWG9 929 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 LRSAM1Q6UWE0 723 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRKN-209ENST00000612485 ERICH1Q86X53 443 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 MMAAQ8IVH4 418 aaKnown RBP17.89■□□□□ 0.45
PRKN-209ENST00000612485 RPL10LQ96L21 214 aaKnown RBP17.89■□□□□ 0.45
PRKN-209ENST00000612485 GBP4Q96PP9 640 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 NPY6RQ99463 290 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 TAB2Q9NYJ8 693 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 SLCO3A1Q9UIG8 710 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 VANGL2Q9ULK5 521 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 PAXBP1Q9Y5B6 917 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 HS3ST4Q9Y661 456 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 CHD8Q9HCK8 2581 aa17.89■□□□□ 0.45
PRKN-209ENST00000612485 EPG5Q9HCE0 2579 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.88■□□□□ 0.45
PRKN-209ENST00000612485 MID1O15344 667 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 PAGE1O75459 146 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 CLDN11O75508 207 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 F9P00740 461 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 ZNF883P0CG24 379 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 CD27P26842 260 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 MZF1P28698 734 aaPredicted RBP17.88■□□□□ 0.45
PRKN-209ENST00000612485 SULT1E1P49888 294 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 RNASE9P60153 205 aaKnown RBP17.88■□□□□ 0.45
PRKN-209ENST00000612485 ZNF177Q13360 481 aaPredicted RBP17.88■□□□□ 0.45
PRKN-209ENST00000612485 CXorf57Q6NSI4 855 aaKnown RBP17.88■□□□□ 0.45
PRKN-209ENST00000612485 NAXDQ8IW45 347 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 IGSF8Q969P0 613 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 BIRC7Q96CA5 298 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 PGAP3Q96FM1 320 aaPredicted RBP17.88■□□□□ 0.45
PRKN-209ENST00000612485 OMDQ99983 421 aa17.88■□□□□ 0.45
PRKN-209ENST00000612485 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms