RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 TMEM217Q8N7C4 229 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 LSM14AQ8ND56 463 aaKnown RBP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 CEP70Q8NHQ1 597 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 CPT1BQ92523 772 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 MASTLQ96GX5 879 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 MAELQ96JY0 434 aaKnown RBP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 HS6ST2Q96MM7 605 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 LBHD1Q9BQE6 289 aaPredicted RBP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 SENP7Q9BQF6 1050 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 REEP2Q9BRK0 252 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 PYM1Q9BRP8 204 aaKnown RBP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 PIMREGQ9BSJ6 248 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 HTATIP2Q9BUP3 242 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 CTDSP1Q9GZU7 261 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 CLPBQ9H078 707 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 PDE11AQ9HCR9 933 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 Q9N2J8 555 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 SPAG4Q9NPE6 437 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 RIC8AQ9NPQ8 531 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 TMEM248Q9NWD8 314 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 TFCP2L1Q9NZI6 479 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 PDP2Q9P2J9 529 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 KLQ9UEF7 1012 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 CD207Q9UJ71 328 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 FBXO4Q9UKT5 387 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 DTX4Q9Y2E6 619 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 DERAQ9Y315 318 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 HEMK1Q9Y5R4 338 aaPredicted RBP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 LRRFIP2Q9Y608 721 aaKnown RBP1.82□□□□□ -2.12
SNORA28-201ENST00000606769 WDR17Q8IZU2 1322 aa1.82□□□□□ -2.12
SNORA28-201ENST00000606769 KAT6AQ92794 2004 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CYP2D7A0A087X1C5 515 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TRBV5-3A0A0A0MS03 114 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 A0A1W2PPC1 479 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TCRBV7S3A2A0A539 114 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CXorf65A6NEN9 183 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 RRN3P2A6NIE6 340 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 C3orf70A6NLC5 250 aaPredicted RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ZNF814B7Z6K7 855 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 MCIDASD6RGH6 385 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 E5RJQ4 531 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 UBE2Q2LH0YL09 131 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PPP6CO00743 305 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ADAM10O14672 748 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ATG13O75143 517 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CNOT3O75175 753 aaKnown RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 NEURL1O76050 574 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SGPL1O95470 568 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CTSAP10619 480 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TNFRSF1BP20333 461 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CD72P21854 359 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TGM2P21980 687 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PAX3P23760 479 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 EPHB2P29323 1055 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PNPLA4P41247 253 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ARHGAP25P42331 645 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PTPN9P43378 593 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 MTNR1AP48039 350 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CCT5P48643 541 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 AARSP49588 968 aaKnown RBP eCLIP1.81□□□□□ -2.12not detected■□□□□ 11.1
SNORA28-201ENST00000606769 RBM5P52756 815 aaKnown RBP eCLIP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 NR1H2P55055 460 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 C21orf58P58505 322 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 BIRC3Q13489 604 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 THOC5Q13769 683 aaKnown RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CBFBQ13951 182 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 RPS6KA2Q15349 733 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PRICKLE4Q2TBC4 344 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 Q4G0T1 1027 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ARL13AQ5H913 290 aaPredicted RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ZNF569Q5MCW4 686 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 CBWD5Q5RIA9 395 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SLC9C2Q5TAH2 1124 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SLC18B1Q6NT16 456 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SLC30A9Q6PML9 568 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SLC2A7Q6PXP3 512 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 DHRS13Q6UX07 377 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PTF1AQ7RTS3 328 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 YTHDF3Q7Z739 585 aaKnown RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 UBE2Q1Q7Z7E8 422 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 NEK8Q86SG6 692 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TMEM200AQ86VY9 491 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TTC30AQ86WT1 665 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ANKRD18AQ8IVF6 992 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 DNAJC10Q8IXB1 793 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 TMEM57Q8N5G2 664 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 NGDNQ8NEJ9 315 aaKnown RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 OSR1Q8TAX0 266 aaPredicted RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PPM1EQ8WY54 764 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 RUBCNQ92622 972 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 HTRA1Q92743 480 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 GOLGA1Q92805 767 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 EME1Q96AY2 570 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 ZBTB10Q96DT7 871 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 RNFT2Q96EX2 444 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 LTV1Q96GA3 475 aaPredicted RBP1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SCLT1Q96NL6 688 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 SIGLEC11Q96RL6 698 aa1.81□□□□□ -2.12
SNORA28-201ENST00000606769 PIGSQ96S52 555 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms