RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TTC39BQ5VTQ0 682 aaPredicted RBP7.91□□□□□ -1.14
MSH6-211ENST00000606499 RNF43Q68DV7 783 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
MSH6-211ENST00000606499 SYT10Q6XYQ8 523 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 NLRP14Q86W24 1093 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 MAP7D3Q8IWC1 876 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 CARNMT1Q8N4J0 409 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 NAT16Q8N8M0 369 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 NETO2Q8NC67 525 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 OR52K2Q8NGK3 314 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 EXD1Q8NHP7 514 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 PCDH19Q8TAB3 1148 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 CSGALNACT1Q8TDX6 532 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 TMA16Q96EY4 203 aaKnown RBP7.91□□□□□ -1.14
MSH6-211ENST00000606499 RBM41Q96IZ5 413 aaKnown RBP7.91□□□□□ -1.14
MSH6-211ENST00000606499 ZNF670Q9BS34 389 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 HEMGNQ9BXL5 484 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 HEBP1Q9NRV9 189 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 RCOR3Q9P2K3 495 aaPredicted RBP7.91□□□□□ -1.14
MSH6-211ENST00000606499 PPARGC1AQ9UBK2 798 aaKnown RBP7.91□□□□□ -1.14
MSH6-211ENST00000606499 ZNF212Q9UDV6 495 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 DNAI1Q9UI46 699 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 DUSP12Q9UNI6 340 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 SORCS3Q9UPU3 1222 aa7.91□□□□□ -1.14
MSH6-211ENST00000606499 CHD5Q8TDI0 1954 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 hCG_1818297A0A087WSY0 165 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 H0Y626 953 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 DCLK1O15075 740 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 MFSD11O43934 449 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CACNG3O60359 315 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 TULP3O75386 442 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CLDN11O75508 207 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 ZRANB2O95218 330 aaKnown RBP eCLIP7.9□□□□□ -1.14
MSH6-211ENST00000606499 LUC7L3O95232 432 aaKnown RBP7.9□□□□□ -1.14
MSH6-211ENST00000606499 ERCC2P18074 760 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 AMPD1P23109 780 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 OR1E1P30953 314 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CD70P32970 193 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 HTR7P34969 479 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 OPRD1P41143 372 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 SLC6A11P48066 632 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 HCAR3P49019 387 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CDH4P55283 916 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 GAD2Q05329 585 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 ADCY2Q08462 1091 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CDH18Q13634 790 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 TAZQ16635 292 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 TFDP3Q5H9I0 405 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 MPP7Q5T2T1 576 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 KAZNQ674X7 775 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 NCBP2-AS2Q69YL0 99 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CXorf57Q6NSI4 855 aaKnown RBP7.9□□□□□ -1.14
MSH6-211ENST00000606499 TXNDC11Q6PKC3 985 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 CHST9Q7L1S5 443 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 RFX6Q8HWS3 928 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 MFN1Q8IWA4 741 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 SFTPA1Q8IWL2 248 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 TP53INP2Q8IXH6 220 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 ETFBKMTQ8IXQ9 262 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 RCOR2Q8IZ40 523 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 GJD3Q8N144 294 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 NPWQ8N729 165 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 PQLC3Q8N755 202 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 RTL3Q8N8U3 475 aaKnown RBP7.9□□□□□ -1.14
MSH6-211ENST00000606499 DNASE1L2Q92874 299 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 FAF2Q96CS3 445 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 RNF157Q96PX1 679 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 NAPGQ99747 312 aaPredicted RBP7.9□□□□□ -1.14
MSH6-211ENST00000606499 CARD9Q9H257 536 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 NOL6Q9H6R4 1146 aaKnown RBP7.9□□□□□ -1.14
MSH6-211ENST00000606499 TRPV5Q9NQA5 729 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 SLC2A4RGQ9NR83 387 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 DNAJC17Q9NVM6 304 aaKnown RBP7.9□□□□□ -1.14
MSH6-211ENST00000606499 TMEM248Q9NWD8 314 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 MUTYHQ9UIF7 546 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 SNX12Q9UMY4 172 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 PIAS3Q9Y6X2 628 aa7.9□□□□□ -1.14
MSH6-211ENST00000606499 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.89□□□□□ -1.15
MSH6-211ENST00000606499 TCRBV7S2A1N4TA0A589 114 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 CTAGE9A4FU28 777 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 WASH4PA8MWX3 477 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 ZNF487B1APH4 448 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 SPECC1L-ADORA2AF8WAN1 911 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 MAP3K6O95382 1288 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 RHOCP08134 193 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 PECAM1P16284 738 aaPredicted RBP7.89□□□□□ -1.15
MSH6-211ENST00000606499 MZF1P28698 734 aaPredicted RBP7.89□□□□□ -1.15
MSH6-211ENST00000606499 HLA-FP30511 346 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 CTHP32929 405 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 PTPN7P35236 360 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 CSKP41240 450 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 DGKGP49619 791 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 ZNF135P52742 658 aaPredicted RBP7.89□□□□□ -1.15
MSH6-211ENST00000606499 COPS2P61201 443 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 PFKPQ01813 784 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 GBE1Q04446 702 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 LMAN2Q12907 356 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 NR1H3Q13133 447 aa7.89□□□□□ -1.15
MSH6-211ENST00000606499 ZNF177Q13360 481 aaPredicted RBP7.89□□□□□ -1.15
MSH6-211ENST00000606499 PPP2R5EQ16537 467 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms