RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 LRSAM1Q6UWE0 723 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 MON1BQ7L1V2 547 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 ARCQ7LC44 396 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 C14orf80Q86SX3 495 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 C3orf20Q8ND61 904 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 OR2T3Q8NH03 318 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 CPLX3Q8WVH0 158 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 PIGKQ92643 395 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 NT5C3BQ969T7 300 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 NUP58Q9BVL2 599 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 MUC3BQ9H195 1237 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 SMOC1Q9H4F8 434 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 TMPRSS4Q9NRS4 437 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 MBD1Q9UIS9 605 aaPredicted RBP16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 CDV3Q9UKY7 258 aaKnown RBP16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 USP34Q70CQ2 3546 aa16.36■□□□□ 0.21
PPFIA4-213ENST00000601609 IGHV1OR15-9A0A0B4J2B8 117 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 RHOCP08134 193 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 NNMTP40261 264 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 CTSOP43234 321 aaPredicted RBP16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 ID4P47928 161 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 IRAK1P51617 712 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 PTP4A2Q12974 167 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 SLC12A1Q13621 1099 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 SF3A2Q15428 464 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 LYSMD4Q5XG99 296 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 ACAD10Q6JQN1 1059 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 DCUN1D2Q6PH85 259 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 APCDD1Q8J025 514 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 FAM172AQ8WUF8 416 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 TTC17Q96AE7 1141 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 MCEEQ96PE7 176 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 MKRN2Q9H000 416 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 TMEM245Q9H330 911 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 CD248Q9HCU0 757 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 CD93Q9NPY3 652 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 VPS45Q9NRW7 570 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 VPS28Q9UK41 221 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 INTS6Q9UL03 887 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 ERVW-1Q9UQF0 538 aa16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-213ENST00000601609 MUC22E2RYF6 1773 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 C2CD4BA6NLJ0 364 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 PRR5-ARHGAP8B1AHC4 643 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 E9PAM4 449 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 FOXD2O60548 495 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 CLDN11O75508 207 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 SKILP12757 684 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 MZF1P28698 734 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 CDH4P55283 916 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 GSCP56915 257 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 ARHGAP8P85298 464 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 ECT2LQ008S8 904 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 CAMK2GQ13555 558 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 RSPO4Q2I0M5 234 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 CCDC14Q49A88 953 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 ACBD5Q5T8D3 534 aaPredicted RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 TFAP2DQ7Z6R9 452 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 FAM124AQ86V42 546 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 LMLNQ96KR4 655 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 RPL10LQ96L21 214 aaKnown RBP16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 MTG2Q9H4K7 406 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 ANLNQ9NQW6 1124 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 TAS2R14Q9NYV8 317 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 SLC25A13Q9UJS0 675 aa16.34■□□□□ 0.21
PPFIA4-213ENST00000601609 CKAP5Q14008 2032 aa16.33■□□□□ 0.21
PPFIA4-213ENST00000601609 ABCA7Q8IZY2 2146 aa16.33■□□□□ 0.21
PPFIA4-213ENST00000601609 BCLAF3A2AJT9 711 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 ATMINO43313 823 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 CNTN5O94779 1100 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 DNTTP04053 509 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 SRPRAP08240 638 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 RRM1P23921 792 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 CD6P30203 668 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 RFC1P35251 1148 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 PTGER3P43115 390 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 PTPN9P43378 593 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 STK19P49842 368 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 COPAP53621 1224 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 SULT2A1Q06520 285 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 FIGNQ5HY92 759 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 SH3PXD2AQ5TCZ1 1133 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 CXorf57Q6NSI4 855 aaKnown RBP16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 SCYL2Q6P3W7 929 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 STRADAQ7RTN6 431 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 MCOLN2Q8IZK6 566 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 RNF214Q8ND24 703 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 GANCQ8TET4 914 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 HSPA12BQ96MM6 686 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 HAPLN3Q96S86 360 aa16.33■□□□□ 0.2
PPFIA4-213ENST00000601609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms