RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	SLCO3A1	Q9UIG8	710 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	WASF3	Q9UPY6	502 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	ERVW-1	Q9UQF0	538 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	OR51B4	Q9Y5P0	310 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	HS3ST4	Q9Y661	456 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	PLXNA2	O75051	1894 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	TMEM131	Q92545	1883 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	TP53BP1	Q12888	1972 aa	Predicted RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM170A	A1A519	330 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	TTC34	A8MYJ7	566 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872		F5H5T6	163 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872		M0QYT0	321 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	SIN3B	O75182	1162 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	NDUFS2	O75306	463 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	PAGE1	O75459	146 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	ADCY5	O95622	1261 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	ASL	P04424	464 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	CYP1A1	P04798	512 aa	Predicted RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	SLC2A3	P11169	496 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	CSRP1	P21291	193 aa	Known RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	OXTR	P30559	389 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	FLT3	P36888	993 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	GGCX	P38435	758 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	CXCR3	P49682	368 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	COPB1	P53618	953 aa	Known RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	FMO1	Q01740	532 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	BNC1	Q01954	994 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	CENPC	Q03188	943 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	ARID5A	Q03989	594 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	SEMA3B	Q13214	749 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	CDH18	Q13634	790 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	ZDHHC17	Q8IUH5	632 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	PTPRN2	Q92932	1015 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	C18orf8	Q96DM3	657 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	TBCB	Q99426	244 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	NUP58	Q9BVL2	599 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM204A	Q9H8W3	233 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	FBRS	Q9HAH7	460 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	TMPRSS4	Q9NRS4	437 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	TMEM63C	Q9P1W3	806 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	SERGEF	Q9UGK8	458 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	SUN2	Q9UH99	717 aa		13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	LIMA1	Q9UHB6	759 aa	Known RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.18	□□□□□ -0.3
FKRP-223	ENST00000600872	CEP295	Q9C0D2	2601 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872		A0A1B0GVM2	712 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	TCAF2	A6NFQ2	919 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	UPK3BL1	B0FP48	263 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	UPK3BL2	E5RIL1	263 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	PES1	O00541	588 aa	Known RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	ARHGAP33	O14559	1287 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	LSM8	O95777	96 aa	Known RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	CFI	P05156	583 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	SRPRA	P08240	638 aa	Known RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	MAPK8	P45983	427 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	NUMB	P49757	651 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	STK19	P49842	368 aa	Predicted RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	VASP	P50552	380 aa	Predicted RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	POLR2F	P61218	127 aa	Known RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	ZBTB16	Q05516	673 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	PTP4A2	Q12974	167 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	NME3	Q13232	169 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	RAB6C	Q53S08	254 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	SH3PXD2A	Q5TCZ1	1133 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	DCAF12L1	Q5VU92	463 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	DAB2IP	Q5VWQ8	1189 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	PSAPL1	Q6NUJ1	521 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	ARC	Q7LC44	396 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	ERICH1	Q86X53	443 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	FRS2	Q8WU20	508 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	CPA5	Q8WXQ8	436 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	RPL10L	Q96L21	214 aa	Known RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	CNTNAP3B	Q96NU0	1288 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	PCDHB18P	Q96TA0	734 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	CNTNAP3	Q9BZ76	1288 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	RAB6C	Q9H0N0	254 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	PCED1A	Q9H1Q7	454 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	DNAAF2	Q9NVR5	837 aa	Known RBP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	COX16	Q9P0S2	106 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	ZNF212	Q9UDV6	495 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	VANGL2	Q9ULK5	521 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	CEP83	Q9Y592	693 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	SNX10	Q9Y5X0	201 aa		13.17	□□□□□ -0.3
FKRP-223	ENST00000600872	IGLV3-10	A0A075B6K4	115 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	TARSL2	A2RTX5	802 aa	Known RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	TYW5	A2RUC4	315 aa	Known RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	LGALS16	A8MUM7	142 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872		H0Y626	953 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	CNTN5	O94779	1100 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	GFPT2	O94808	682 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ENDOD1	O94919	500 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	ACADM	P11310	421 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	UNG	P13051	313 aa	Predicted RBP	13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	CD59	P13987	128 aa		13.16	□□□□□ -0.3
FKRP-223	ENST00000600872	VAV1	P15498	845 aa		13.16	□□□□□ -0.3

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