RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SRGAP2O75044 1071 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 RTN2O75298 545 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 CLDN11O75508 207 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 ASLP04424 464 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 HLA-EP13747 358 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 NDUFV2P19404 249 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 OXCT1P55809 520 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 ST8SIA6P61647 398 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 RPL7AP62424 266 aaKnown RBP29.05■■■□□ 2.24
SSBP4-206ENST00000599699 BYSLQ13895 437 aaKnown RBP29.05■■■□□ 2.24
SSBP4-206ENST00000599699 ELF2Q15723 593 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 SPECC1LQ69YQ0 1117 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 TTC17Q96AE7 1141 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 CD248Q9HCU0 757 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 PARVAQ9NVD7 372 aa29.05■■■□□ 2.24
SSBP4-206ENST00000599699 PTPRZ1P23471 2315 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-206ENST00000599699 ATMINO43313 823 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-206ENST00000599699 DESP17661 470 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 NUMBP49757 651 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 ZNF143P52747 638 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-206ENST00000599699 SLC12A1Q13621 1099 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 PTPRNQ16849 979 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 PLEKHG6Q3KR16 790 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 HGSNATQ68CP4 663 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 KIAA1324Q6UXG2 1013 aaKnown RBP29.04■■■□□ 2.24
SSBP4-206ENST00000599699 C11orf74Q86VG3 221 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 APCDD1Q8J025 514 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 ZNF366Q8N895 744 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 CENPIQ92674 756 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-206ENST00000599699 SLC6A17Q9H1V8 727 aa29.04■■■□□ 2.24
SSBP4-206ENST00000599699 EP300Q09472 2414 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-206ENST00000599699 FAM186AA6NE01 2351 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 E9PAM4 449 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 MAP3K13O43283 966 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 RHOBTB1O94844 696 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 RETP07949 1114 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 ADRA1BP35368 520 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 CDH4P55283 916 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 HDAC4P56524 1084 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 MAMLD1Q13495 774 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 TRIM14Q14142 442 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 PLK5Q496M5 336 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 C5orf22Q49AR2 442 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 PPP1R15BQ5SWA1 713 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 RNF219Q5W0B1 726 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-206ENST00000599699 ZNF653Q96CK0 615 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 MRGPRX1Q96LB2 322 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 TMEM245Q9H330 911 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 ADAMTS1Q9UHI8 967 aa29.03■■■□□ 2.24
SSBP4-206ENST00000599699 CCP110O43303 1012 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 CNTN5O94779 1100 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 TPM1P09493 284 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 MZF1P28698 734 aaPredicted RBP29.02■■■□□ 2.24
SSBP4-206ENST00000599699 P2RY2P41231 377 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 CXorf57Q6NSI4 855 aaKnown RBP29.02■■■□□ 2.24
SSBP4-206ENST00000599699 SCYL2Q6P3W7 929 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 TRIM11Q96F44 468 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 ZC3H10Q96K80 434 aaKnown RBP29.02■■■□□ 2.24
SSBP4-206ENST00000599699 PPP1R9BQ96SB3 815 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 CNPY3Q9BT09 278 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 DUSP15Q9H1R2 295 aaPredicted RBP29.02■■■□□ 2.24
SSBP4-206ENST00000599699 PRDM16Q9HAZ2 1276 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 CNOT8Q9UFF9 292 aaKnown RBP29.02■■■□□ 2.24
SSBP4-206ENST00000599699 ERVW-1Q9UQF0 538 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 FRYLO94915 3013 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 OTOGLQ3ZCN5 2332 aa29.02■■■□□ 2.24
SSBP4-206ENST00000599699 PLEKP08567 350 aaPredicted RBP29.01■■■□□ 2.23
SSBP4-206ENST00000599699 BCKDHBP21953 392 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 CTSOP43234 321 aaPredicted RBP29.01■■■□□ 2.23
SSBP4-206ENST00000599699 ECT2LQ008S8 904 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 ALFQ53S48 1182 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 VSTM4Q8IW00 320 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 ZNF683Q8IZ20 524 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 MPP6Q9NZW5 540 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 MYO1AQ9UBC5 1043 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 SUN2Q9UH99 717 aa29.01■■■□□ 2.23
SSBP4-206ENST00000599699 DRGXA6NNA5 263 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 ZNF217O75362 1048 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 MAP7D1Q3KQU3 841 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 PLEKHA7Q6IQ23 1121 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 TFAP2DQ7Z6R9 452 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 TMPRSS6Q8IU80 811 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 CCDC185Q8N715 623 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 FRMD1Q8N878 549 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 MKRN2Q9H000 416 aaKnown RBP29■■■□□ 2.23
SSBP4-206ENST00000599699 MUC3BQ9H195 1237 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 OR12D3Q9UGF7 316 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 VPS28Q9UK41 221 aa29■■■□□ 2.23
SSBP4-206ENST00000599699 EML5Q05BV3 1969 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 RHOCP08134 193 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 SRPRAP08240 638 aaKnown RBP28.99■■■□□ 2.23
SSBP4-206ENST00000599699 MYBL1P10243 752 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 PSMA2P25787 234 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 SULT2A1Q06520 285 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 TSR1Q2NL82 804 aaKnown RBP28.99■■■□□ 2.23
SSBP4-206ENST00000599699 TMC6Q7Z403 805 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 CACUL1Q86Y37 369 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 KIAA2013Q8IYS2 634 aa28.99■■■□□ 2.23
SSBP4-206ENST00000599699 PRCCQ92733 491 aaPredicted RBP28.99■■■□□ 2.23
SSBP4-206ENST00000599699 SIPA1Q96FS4 1042 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms