RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 PSMB4P28070 264 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 ABCG1P45844 678 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 IGBP1P78318 339 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 RBP5P82980 135 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 TTLL12Q14166 644 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 TBC1D25Q3MII6 688 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 PPM1LQ5SGD2 360 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 METTL21CQ5VZV1 264 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 B3GNT6Q6ZMB0 384 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 HACE1Q8IYU2 909 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 PYROXD2Q8N2H3 581 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 CPNE1Q99829 537 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 ASB7Q9H672 318 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 DPP3Q9NY33 737 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 TMCO1Q9UM00 188 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 ATP9BO43861 1147 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 CRTAMO95727 393 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PIK3R1P27986 724 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 THOP1P52888 689 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PKNOX1P55347 436 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 SNX16P57768 344 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 SLC10A6Q3KNW5 377 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 NADK2Q4G0N4 442 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PABPC1LQ4VXU2 614 aaKnown RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 BNC2Q6ZN30 1099 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 STRA8Q7Z7C7 330 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 LCA5Q86VQ0 697 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 GALNT4Q8N4A0 578 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 CCDC185Q8N715 623 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 CLEC4CQ8WTT0 213 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 LENG1Q96BZ8 264 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 C12orf42Q96LP6 360 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PRPF18Q99633 342 aaKnown RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 ACSS2Q9NR19 701 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PRPF19Q9UMS4 504 aaKnown RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 CD1EP15812 388 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 SPRP35270 261 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 SERPINB8P50452 374 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 TNFAIP2Q03169 654 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 TMEM110Q86TL2 294 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 DSELQ8IZU8 1212 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 USP13Q92995 863 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 ILKAPQ9H0C8 392 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PRMT7Q9NVM4 692 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PCDHGB4Q9UN71 923 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 MAGED2Q9UNF1 606 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PCDHGB5Q9Y5G0 923 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 COL11A1P12107 1806 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 A0A096LPK6 155 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 ZNF487B1APH4 448 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 TRIM13O60858 407 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 FBXO21O94952 628 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 TNFAIP8O95379 198 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 ENO3P13929 434 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 KLHDC10Q6PID8 442 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 P2RY11Q96G91 374 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 AGAP3Q96P47 875 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 SLC4A5Q9BY07 1137 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 CAB39LQ9H9S4 337 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 BCAP29Q9UHQ4 241 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 RAB26Q9ULW5 256 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 PHF24Q9UPV7 400 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 SNX9Q9Y5X1 595 aa17.79■□□□□ 0.44
ARHGEF1-213ENST00000595897 VILLO15195 856 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 TRPA1O75762 1119 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 TMCC1O94876 653 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 TGFB3P10600 412 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 LCP1P13796 627 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 CCDC130P13994 396 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 EPHA3P29320 983 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 IFRD2Q12894 506 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 DLG2Q15700 870 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 SH2D4BQ5SQS7 431 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 NXNQ6DKJ4 435 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 ZNF669Q96BR6 464 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 MOCOSQ96EN8 888 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 HNRNPRO43390 633 aaKnown RBP17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 STRNO43815 780 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 XRCC1P18887 633 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 USP46P62068 366 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 OLIG2Q13516 323 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 CYLC2Q14093 348 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 OLFML2BQ68BL8 750 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 FSTL4Q6MZW2 842 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 FAM131BQ86XD5 332 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 CATSPER1Q8NEC5 780 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 BHLHE22Q8NFJ8 381 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 GPR20Q99678 358 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 PREBQ9HCU5 417 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 GALNT8Q9NY28 637 aa17.78■□□□□ 0.44
ARHGEF1-213ENST00000595897 HACD1B0YJ81 288 aa17.77■□□□□ 0.44
ARHGEF1-213ENST00000595897 PDLIM1O00151 329 aa17.77■□□□□ 0.44
ARHGEF1-213ENST00000595897 MFSD11O43934 449 aa17.77■□□□□ 0.44
ARHGEF1-213ENST00000595897 USP12O75317 370 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms