RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MCOLN2Q8IZK6 566 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 ZNF557Q8N988 423 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 CENPIQ92674 756 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 MRGPRX3Q96LB0 322 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 MRGPRX1Q96LB2 322 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RPRD1AQ96P16 312 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 MKRN2Q9H000 416 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 SIK2Q9H0K1 926 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RAB23Q9ULC3 237 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 IGLV3-10A0A075B6K4 115 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 SIGLEC16A6NMB1 481 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 H0Y626 953 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 ATMINO43313 823 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 EPN2O95208 641 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 C7P10643 843 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 TNFAIP3P21580 790 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 MZF1P28698 734 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 SDC4P31431 198 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 NUMBP49757 651 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 OGDHQ02218 1023 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 SPEM2Q0P670 501 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 MTA1Q13330 715 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 CDO1Q16878 200 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 PLEKHG6Q3KR16 790 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 FNDC3BQ53EP0 1204 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 USP39Q53GS9 565 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 ALFQ53S48 1182 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 PMS2CLQ68D20 193 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 SERPINA13PQ6UXR4 307 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 SND1Q7KZF4 910 aaKnown RBP eCLIP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 KIAA2013Q8IYS2 634 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 ALG14Q96F25 216 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 NUP58Q9BVL2 599 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 SELENOOQ9BVL4 669 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 MAGEB5Q9BZ81 275 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 MTG2Q9H4K7 406 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 KIAA1522Q9P206 1035 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 ZNF212Q9UDV6 495 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 GMEB2Q9UKD1 530 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 CAPN11Q9UMQ6 739 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 NEU3Q9UQ49 428 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 OR51B4Q9Y5P0 310 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 ITIH6Q6UXX5 1313 aa11.33□□□□□ -0.6
SHKBP1-206ENST00000595523 DRGXA6NNA5 263 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 CCP110O43303 1012 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 ATP5BP06576 529 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 EPHX1P07099 455 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 PLEKP08567 350 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 GPD1P21695 349 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 PLK1P53350 603 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 ZBED6P86452 979 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 CAMK2GQ13555 558 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 STARD3Q14849 445 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 STRADAQ7RTN6 431 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 CCDC185Q8N715 623 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 CPLX3Q8WVH0 158 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 SYN2Q92777 582 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 LOXL4Q96JB6 756 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 HAPLN3Q96S86 360 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 MPP6Q9NZW5 540 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 TBC1D30Q9Y2I9 924 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 ASCC3Q8N3C0 2202 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 PCDH15Q96QU1 1955 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 PLXNA2O75051 1894 aa11.32□□□□□ -0.6
SHKBP1-206ENST00000595523 IGHV1OR15-9A0A0B4J2B8 117 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 E9PAM4 449 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 AP5Z1O43299 807 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 CLDN11O75508 207 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 ASLP04424 464 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 GZMAP12544 262 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 CASP14P31944 242 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 ADRA1BP35368 520 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 STK19P49842 368 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 CDH4P55283 916 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 ZNF252P-AS1Q0IIN9 211 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 MAMLD1Q13495 774 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 SLC12A1Q13621 1099 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 E2F5Q15329 346 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 CCDC6Q16204 474 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 PLA2G2CQ5R387 149 aa11.31□□□□□ -0.6
SHKBP1-206ENST00000595523 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms