RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 RNF219Q5W0B1 726 aaPredicted RBP24.23■■□□□ 1.47
LSM4-204ENST00000594828 FBXL22Q6P050 247 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 ERICH1Q86X53 443 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 CIR1Q86X95 450 aaPredicted RBP24.23■■□□□ 1.47
LSM4-204ENST00000594828 DHX40Q8IX18 779 aaKnown RBP24.23■■□□□ 1.47
LSM4-204ENST00000594828 ZCCHC9Q8N567 271 aaKnown RBP24.23■■□□□ 1.47
LSM4-204ENST00000594828 OR2I1PQ8NGU4 316 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 RPRD1AQ96P16 312 aaPredicted RBP24.23■■□□□ 1.47
LSM4-204ENST00000594828 BTBD1Q9H0C5 482 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.23■■□□□ 1.47
LSM4-204ENST00000594828 SLCO3A1Q9UIG8 710 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 CNOT1A5YKK6 2376 aaKnown RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 PCDH15Q96QU1 1955 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 A0A1B0GVM2 712 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 TARSL2A2RTX5 802 aaKnown RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 TCAF2A6NFQ2 919 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 TTC34A8MYJ7 566 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 UPK3BL1B0FP48 263 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 UPK3BL2E5RIL1 263 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 F8VZ95 297 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 BCAT2O15382 392 aaPredicted RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 TPM2P07951 284 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 GABRB2P47870 512 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 AUHQ13825 339 aaKnown RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 KRT31Q15323 416 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 CDKAL1Q5VV42 579 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 NOP9Q86U38 636 aaKnown RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 RPL10LQ96L21 214 aaKnown RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 NPY6RQ99463 290 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 ZDHHC5Q9C0B5 715 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 C6orf106Q9H6K1 298 aaPredicted RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 DNAAF2Q9NVR5 837 aaKnown RBP24.22■■□□□ 1.47
LSM4-204ENST00000594828 STAP1Q9ULZ2 295 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 SCML1Q9UN30 329 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 NCKAP1Q9Y2A7 1128 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 HS3ST4Q9Y661 456 aa24.22■■□□□ 1.47
LSM4-204ENST00000594828 GOLGA6L22H0YM25 854 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 PAGE1O75459 146 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 SEMA4FO95754 770 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 PDGFRAP16234 1089 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 NNMTP40261 264 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 OXCT1P55809 520 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 SHC2P98077 582 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 C9orf64Q5T6V5 341 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 SASS6Q6UVJ0 657 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 PIP4P1Q86T03 277 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 SNX19Q92543 992 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 IGSF8Q969P0 613 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 PPP1R9BQ96SB3 815 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 WDCPQ9H6R7 721 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 SGK2Q9HBY8 427 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 FANCLQ9NW38 375 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 VANGL2Q9ULK5 521 aa24.21■■□□□ 1.47
LSM4-204ENST00000594828 ITIH6Q6UXX5 1313 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 EDDM13A0A1B0GTR0 161 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 LSM8O95777 96 aaKnown RBP24.2■■□□□ 1.46
LSM4-204ENST00000594828 MMEP08473 750 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 MZF1P28698 734 aaPredicted RBP24.2■■□□□ 1.46
LSM4-204ENST00000594828 SCNN1AP37088 669 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 PLK1P53350 603 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 SULT2A1Q06520 285 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 SFSWAPQ12872 951 aaKnown RBP24.2■■□□□ 1.46
LSM4-204ENST00000594828 GRIK2Q13002 908 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 FKBP15Q5T1M5 1219 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 FAM102AQ5T9C2 384 aaPredicted RBP24.2■■□□□ 1.46
LSM4-204ENST00000594828 USP30Q70CQ3 517 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 SND1Q7KZF4 910 aaKnown RBP eCLIP24.2■■□□□ 1.46
LSM4-204ENST00000594828 XYLT1Q86Y38 959 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 MSANTD4Q8NCY6 345 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 GANCQ8TET4 914 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 SIK2Q9H0K1 926 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 GANQ9H2C0 597 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 PABPC3Q9H361 631 aaKnown RBP24.2■■□□□ 1.46
LSM4-204ENST00000594828 PIGVQ9NUD9 493 aa24.2■■□□□ 1.46
LSM4-204ENST00000594828 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.2■■□□□ 1.46
LSM4-204ENST00000594828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.19■■□□□ 1.46
LSM4-204ENST00000594828 FAM170AA1A519 330 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 CXCR3P49682 368 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 NUMBP49757 651 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 SULT1E1P49888 294 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 CENPCQ03188 943 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 SLC14A1Q13336 389 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 ZNF177Q13360 481 aaPredicted RBP24.19■■□□□ 1.46
LSM4-204ENST00000594828 CST6Q15828 149 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 BRMS1LQ5PSV4 323 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 OTUD1Q5VV17 481 aaPredicted RBP24.19■■□□□ 1.46
LSM4-204ENST00000594828 CXorf57Q6NSI4 855 aaKnown RBP24.19■■□□□ 1.46
LSM4-204ENST00000594828 MMAAQ8IVH4 418 aaKnown RBP24.19■■□□□ 1.46
LSM4-204ENST00000594828 C1orf216Q8TAB5 229 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 EPS8L1Q8TE68 723 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 CPA5Q8WXQ8 436 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 NT5C3BQ969T7 300 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 ADAM33Q9BZ11 813 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 TKTL2Q9H0I9 626 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 ANO10Q9NW15 660 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 FBXL12Q9NXK8 326 aa24.19■■□□□ 1.46
LSM4-204ENST00000594828 ASCC3Q8N3C0 2202 aaKnown RBP24.19■■□□□ 1.46
LSM4-204ENST00000594828 GJB3O75712 270 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 GFPT2O94808 682 aa24.18■■□□□ 1.46
LSM4-204ENST00000594828 ADCY5O95622 1261 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms