RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 FKTNO75072 461 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 PDE5AO76074 875 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 SMIM18P0DKX4 95 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 AMPD1P23109 780 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 ARFIP2P53365 341 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 OTUD4Q01804 1114 aaKnown RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 MED21Q13503 144 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 TAZQ16635 292 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 MDH1BQ5I0G3 518 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 ZDHHC17Q8IUH5 632 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 CROCCP3Q8IVE0 287 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 SRRM1Q8IYB3 904 aaKnown RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 SLC35B2Q8TB61 432 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 ACTL9Q8TC94 416 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 SPOCK2Q92563 424 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 C9orf72Q96LT7 481 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 CRTAC1Q9NQ79 661 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 STARD7Q9NQZ5 370 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 I3L4J1 428 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 MAGEC1O60732 1142 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 CDH16O75309 829 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 BEST1O76090 585 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 TFE3P19532 575 aaPredicted RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 GRK4P32298 578 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 RPL5P46777 297 aaKnown RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 ASPHQ12797 758 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 SPARCL1Q14515 664 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 PAN2Q504Q3 1202 aaKnown RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 TIGD5Q53EQ6 642 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 BBS12Q6ZW61 710 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 NET1Q7Z628 596 aaPredicted RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 SLC43A3Q8NBI5 491 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 OR6Y1Q8NGX8 325 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 LBHD1Q9BQE6 289 aaPredicted RBP15.79■□□□□ 0.12
PNKP-204ENST00000594661 FOXP3Q9BZS1 431 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 DNAI2Q9GZS0 605 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 NAALADL1Q9UQQ1 740 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 PTCH2Q9Y6C5 1203 aa15.79■□□□□ 0.12
PNKP-204ENST00000594661 TDRD15B5MCY1 1934 aaKnown RBP15.78■□□□□ 0.12
PNKP-204ENST00000594661 NDC80O14777 642 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 XPO1O14980 1071 aaKnown RBP15.78■□□□□ 0.12
PNKP-204ENST00000594661 PRPF4O43172 522 aaKnown RBP eCLIP15.78■□□□□ 0.126e-7■■■■□ 23.2
PNKP-204ENST00000594661 CBFA2T3O75081 653 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 HAUS5O94927 633 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 UQCRBP14927 111 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 SDC4P31431 198 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 RPL9P32969 192 aaKnown RBP15.78■□□□□ 0.12
PNKP-204ENST00000594661 MAGEA4P43358 317 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 SNX16P57768 344 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 AP2B1P63010 937 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 XIAPP98170 497 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 MAP7D1Q3KQU3 841 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 THOC7Q6I9Y2 204 aaKnown RBP15.78■□□□□ 0.12
PNKP-204ENST00000594661 ZNF598Q86UK7 904 aaKnown RBP15.78■□□□□ 0.12
PNKP-204ENST00000594661 PIGZQ86VD9 579 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 RFX6Q8HWS3 928 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 RELL1Q8IUW5 271 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 TTC13Q8NBP0 860 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 FAM172AQ8WUF8 416 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 CALN1Q9BXU9 219 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 DUSP16Q9BY84 665 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 ADAM33Q9BZ11 813 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 PCDH9Q9HC56 1237 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 GPAMQ9HCL2 828 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 SAYSD1Q9NPB0 183 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
PNKP-204ENST00000594661 UBN1Q9NPG3 1134 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.78■□□□□ 0.12
PNKP-204ENST00000594661 TAS2R1Q9NYW7 299 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 ZNHIT2Q9UHR6 403 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 FADS3Q9Y5Q0 445 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 SQORQ9Y6N5 450 aa15.78■□□□□ 0.12
PNKP-204ENST00000594661 DNAJC6O75061 913 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 RAB15P59190 212 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 KRT72Q14CN4 511 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 HSP90AA5PQ58FG0 334 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 ZNF362Q5T0B9 420 aaPredicted RBP15.77■□□□□ 0.12
PNKP-204ENST00000594661 SLC26A9Q7LBE3 791 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 RTN4RL1Q86UN2 441 aaPredicted RBP15.77■□□□□ 0.12
PNKP-204ENST00000594661 TMEM86AQ8N2M4 240 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 PGBD4Q96DM1 585 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 HSPBAP1Q96EW2 488 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 HSFY1Q96LI6 401 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 FRMD8P1Q9BZ68 369 aaPredicted RBP15.77■□□□□ 0.12
PNKP-204ENST00000594661 C10orf88Q9H8K7 445 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 DDX18Q9NVP1 670 aaKnown RBP15.77■□□□□ 0.12
PNKP-204ENST00000594661 DMTF1Q9Y222 760 aa15.77■□□□□ 0.12
PNKP-204ENST00000594661 TSC2P49815 1807 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 SH3PXD2BA1X283 911 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 PRPSAP2O60256 369 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 NPR3P17342 541 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 ACADSBP45954 432 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 CLCN2P51788 898 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 CHN2P52757 468 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 ADIGQ0VDE8 80 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 MMRN1Q13201 1228 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 MORF4L2Q15014 288 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 TRMT5Q32P41 509 aaKnown RBP15.77■□□□□ 0.11
PNKP-204ENST00000594661 TMCO4Q5TGY1 634 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms