RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 NETO2Q8NC67 525 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 ZIM3Q96PE6 472 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 VAT1Q99536 393 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 CORO1BQ9BR76 489 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 MAN1C1Q9NR34 630 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 MSRAQ9UJ68 235 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 NEU3Q9UQ49 428 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 GOLGA8MH3BSY2 632 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 TP73O15350 636 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 CCL16O15467 120 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 XYLBO75191 536 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 CKMP06732 381 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 APRTP07741 180 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 MYL4P12829 197 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 VAV1P15498 845 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 EIF3BP55884 814 aaKnown RBP15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 ERVK-21P61565 698 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 ITPRIPL1Q6GPH6 555 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 FAM109BQ6ICB4 259 aaPredicted RBP15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 LRIG3Q6UXM1 1119 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 PID1Q7Z2X4 250 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 TFAP2DQ7Z6R9 452 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 ZNF354CQ86Y25 554 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 LGI2Q8N0V4 545 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 NAT8LQ8N9F0 302 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 EXOC4Q96A65 974 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 AZIN2Q96A70 460 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 PKNOX2Q96KN3 472 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 TXLNGYQ9BZA5 131 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 RNF38Q9H0F5 515 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 SAYSD1Q9NPB0 183 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 DNAJC17Q9NVM6 304 aaKnown RBP15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 TMEM248Q9NWD8 314 aa15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 LSM7Q9UK45 103 aaKnown RBP15.31■□□□□ 0.04
GTF2F1-202ENST00000593678 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 IGLV3-10A0A075B6K4 115 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 TRAV19A0A0A6YYK7 116 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 ARHGAP42A6NI28 874 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 H3BNC9 293 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 KCNK1O00180 336 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 STC2O76061 302 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 CCNCP24863 283 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 IRS1P35568 1242 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 NDST2P52849 883 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 RAB30Q15771 203 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 TXNDC8Q6A555 127 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 TMEM150AQ86TG1 271 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 IQCKQ8N0W5 287 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 TTC25Q96NG3 672 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 KLF16Q9BXK1 252 aaPredicted RBP15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 PHACTR1Q9C0D0 580 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 CDC42EP4Q9H3Q1 356 aaKnown RBP15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 SEMA4AQ9H3S1 761 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 RETREG1Q9H6L5 497 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 IL21Q9HBE4 155 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 SMPD4Q9NXE4 827 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 TRHDEQ9UKU6 1024 aa15.3■□□□□ 0.04
GTF2F1-202ENST00000593678 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 TYW5A2RUC4 315 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 HNRNPA1P09651 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 PFKLP17858 780 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 OR1E1P30953 314 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 MAPKAPK2P49137 400 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 CYP4F8P98187 520 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 UAP1Q16222 522 aaPredicted RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 ANO4Q32M45 955 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 ARHGAP15Q53QZ3 475 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 SPRED2Q7Z698 418 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 TP53INP2Q8IXH6 220 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 UMODL1-AS1Q8N2C9 162 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 ARL14EPQ8N8R7 260 aaPredicted RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 SLC22A17Q8WUG5 538 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 NSMCE1Q8WV22 266 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 PRMT1Q99873 361 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 ETNK1Q9HBU6 452 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 GKN1Q9NS71 199 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 MTCL1Q9Y4B5 1905 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 GOLGA6L7A0A1B0GV03 622 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 A0A1W2PRU2 124 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 DRGXA6NNA5 263 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 EIF3HO15372 352 aaKnown RBP eCLIP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 RIPK2O43353 540 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 CLASP2O75122 1294 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 ARHGEF15O94989 841 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 LATS1O95835 1130 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 PTPN2P17706 415 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 HOXA9P31269 272 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 MAGEA4P43358 317 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 PDIA2Q13087 525 aaKnown RBP15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 KCNJ11Q14654 390 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 CEP85LQ5SZL2 805 aa15.29■□□□□ 0.04
GTF2F1-202ENST00000593678 ADGRF1Q5T601 910 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms