RNA–Protein interactions for RNA: ENST00000590509.5

PTPRS-208, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best) BASIC

Gene PTPRS, Length 893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-208ENST00000590509 GABREP78334 506 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 POM121L1PQ3SYA9 428 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 FOXD4L6Q3SYB3 417 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-208ENST00000590509 PITRM1Q5JRX3 1037 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 FOXD4L3Q6VB84 417 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-208ENST00000590509 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-208ENST00000590509 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
PTPRS-208ENST00000590509 ASCL3Q9NQ33 180 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 TSPAN16Q9UKR8 245 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 SARDHQ9UL12 918 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 U3KQA8 63 aa16.6■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3DA0A087WVF3 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3IA0A087WXS9 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3EA0A087X179 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3KA0A087X1G2 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 A0A1B0GVM2 712 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3FA6NER0 549 aaPredicted RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3LB9A6J9 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 XPO1O14980 1071 aaKnown RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 KLK10O43240 276 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 ACSL4O60488 711 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 LATS1O95835 1130 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 CALCAP01258 141 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3HP0C7X1 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 C6P13671 934 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 DAOAP59103 153 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 RHDQ02161 417 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3GQ6DHY5 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3CQ6IPX1 549 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 NAPEPLDQ6IQ20 393 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TMC6Q7Z403 805 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 TBC1D3Q8IZP1 549 aaPredicted RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 CARNMT1Q8N4J0 409 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 MFSD2AQ8NA29 543 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 RNF139Q8WU17 664 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 FAM131CQ96AQ9 280 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 EEF2KMTQ96G04 330 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 MYOCQ99972 504 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 OLA1Q9NTK5 396 aaKnown RBP16.59■□□□□ 0.25
PTPRS-208ENST00000590509 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 SSUH2Q9Y2M2 353 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 ITIH6Q6UXX5 1313 aa16.59■□□□□ 0.25
PTPRS-208ENST00000590509 RNF103O00237 685 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 FFAR2O15552 330 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 ACTN4O43707 911 aaKnown RBP16.58■□□□□ 0.24
PTPRS-208ENST00000590509 OPA1O60313 960 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 USP12O75317 370 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 LCP1P13796 627 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 MZF1P28698 734 aaPredicted RBP16.58■□□□□ 0.24
PTPRS-208ENST00000590509 RGS7P49802 495 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 TMPRSS3P57727 454 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 MPP7Q5T2T1 576 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 WBP1Q96G27 269 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 VCPIP1Q96JH7 1222 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 FCRL2Q96LA5 508 aaPredicted RBP16.58■□□□□ 0.24
PTPRS-208ENST00000590509 ZSWIM1Q9BR11 485 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 IMPG2Q9BZV3 1241 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 TRIM4Q9C037 500 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 OSBPL2Q9H1P3 480 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 LRRC4Q9HBW1 653 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 PCDHA7Q9UN72 937 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 MAPK8IP1Q9UQF2 711 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 KIF26BQ2KJY2 2108 aa16.58■□□□□ 0.24
PTPRS-208ENST00000590509 TARSL2A2RTX5 802 aaKnown RBP16.57■□□□□ 0.24
PTPRS-208ENST00000590509 SLC28A2O43868 658 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 RNASEH1O60930 286 aaKnown RBP16.57■□□□□ 0.24
PTPRS-208ENST00000590509 WISP1O95388 367 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 IL1BP01584 269 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 FYNP06241 537 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 DGKAP23743 735 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 ZNF445P59923 1031 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 ST8SIA6P61647 398 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 KCNC4Q03721 635 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 ZNF211Q13398 564 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-208ENST00000590509 DCAF6Q58WW2 860 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 KCNE4Q8WWG9 221 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 KLK6Q92876 244 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 ZNF578Q96N58 590 aaPredicted RBP16.57■□□□□ 0.24
PTPRS-208ENST00000590509 NOX5Q96PH1 765 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 MAGEF1Q9HAY2 307 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 TMEM8AQ9HCN3 771 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 ABCC13Q9NSE7 274 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 TRAF3IP3Q9Y228 551 aa16.57■□□□□ 0.24
PTPRS-208ENST00000590509 EDDM13A0A1B0GTR0 161 aa16.56■□□□□ 0.24
PTPRS-208ENST00000590509 CSO75390 466 aaKnown RBP16.56■□□□□ 0.24
PTPRS-208ENST00000590509 DXOO77932 396 aaKnown RBP16.56■□□□□ 0.24
PTPRS-208ENST00000590509 ASLP04424 464 aa16.56■□□□□ 0.24
PTPRS-208ENST00000590509 PRR29P0C7W0 189 aa16.56■□□□□ 0.24
PTPRS-208ENST00000590509 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
PTPRS-208ENST00000590509 C5AR1P21730 350 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms