RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-221ENST00000589867 SIK2Q9H0K1 926 aa17.86■□□□□ 0.45
MBD1-221ENST00000589867 CAPN11Q9UMQ6 739 aa17.86■□□□□ 0.45
MBD1-221ENST00000589867 CEP192Q8TEP8 1941 aa17.86■□□□□ 0.45
MBD1-221ENST00000589867 A0A1B0GVM2 712 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 TCAF2A6NFQ2 919 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 TMCO5BA8MYB1 307 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 RETP07949 1114 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 PLEKP08567 350 aaPredicted RBP17.85■□□□□ 0.45
MBD1-221ENST00000589867 NUMBP49757 651 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 PLK1P53350 603 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 KLHL30Q0D2K2 578 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 CAMK2GQ13555 558 aaPredicted RBP17.85■□□□□ 0.45
MBD1-221ENST00000589867 CDH18Q13634 790 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 CDO1Q16878 200 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 PLEKHG6Q3KR16 790 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 CHD5Q8TDI0 1954 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 SYN2Q92777 582 aaPredicted RBP17.85■□□□□ 0.45
MBD1-221ENST00000589867 C1orf74Q96LT6 269 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 RPRD1AQ96P16 312 aaPredicted RBP17.85■□□□□ 0.45
MBD1-221ENST00000589867 MTG2Q9H4K7 406 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 KIAA1522Q9P206 1035 aaPredicted RBP17.85■□□□□ 0.45
MBD1-221ENST00000589867 NEU3Q9UQ49 428 aa17.85■□□□□ 0.45
MBD1-221ENST00000589867 ITIH6Q6UXX5 1313 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 H0Y626 953 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 SDC4P31431 198 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 ZBED6P86452 979 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 MTA1Q13330 715 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 MAMLD1Q13495 774 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 USP39Q53GS9 565 aaKnown RBP17.84■□□□□ 0.45
MBD1-221ENST00000589867 MANEALQ5VSG8 457 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 TTC39BQ5VTQ0 682 aaPredicted RBP17.84■□□□□ 0.45
MBD1-221ENST00000589867 PMS2CLQ68D20 193 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 SDE2Q6IQ49 451 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 STRADAQ7RTN6 431 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 CCDC185Q8N715 623 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 ZNF557Q8N988 423 aaPredicted RBP17.84■□□□□ 0.45
MBD1-221ENST00000589867 CPLX3Q8WVH0 158 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 VCPIP1Q96JH7 1222 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 HAPLN3Q96S86 360 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 SELENOOQ9BVL4 669 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 TRIM7Q9C029 511 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 MPP6Q9NZW5 540 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 BCCIPQ9P287 314 aaKnown RBP eCLIP17.84■□□□□ 0.45
MBD1-221ENST00000589867 NCDNQ9UBB6 729 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 TBC1D30Q9Y2I9 924 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 PI4KAP42356 2102 aa17.84■□□□□ 0.45
MBD1-221ENST00000589867 IGHV1OR15-9A0A0B4J2B8 117 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 TYW5A2RUC4 315 aaKnown RBP17.83■□□□□ 0.44
MBD1-221ENST00000589867 E9PAM4 449 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 FAM72CH0Y354 149 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 CCP110O43303 1012 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 ATMINO43313 823 aaPredicted RBP17.83■□□□□ 0.44
MBD1-221ENST00000589867 EPN2O95208 641 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 FTLP02792 175 aaPredicted RBP17.83■□□□□ 0.44
MBD1-221ENST00000589867 GZMAP12544 262 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 POLR2EP19388 210 aaKnown RBP17.83■□□□□ 0.44
MBD1-221ENST00000589867 GPD1P21695 349 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 ADRA1BP35368 520 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 RABGAP1LQ5R372 815 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 FAM72AQ5TYM5 149 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 FAM72DQ6L9T8 149 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 DNAJC24Q6P3W2 148 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 SERPINA13PQ6UXR4 307 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 SND1Q7KZF4 910 aaKnown RBP eCLIP17.83■□□□□ 0.44
MBD1-221ENST00000589867 FAM72BQ86X60 149 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 ARFGAP1Q8N6T3 406 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 FAM172AQ8WUF8 416 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 LOXL4Q96JB6 756 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 MCEEQ96PE7 176 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 ISCUQ9H1K1 167 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 PRSS16Q9NQE7 514 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 SLCO3A1Q9UIG8 710 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 RAB23Q9ULC3 237 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 NENFQ9UMX5 172 aa17.83■□□□□ 0.44
MBD1-221ENST00000589867 NYNRINQ9P2P1 1898 aaKnown RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 ATP5BP06576 529 aaKnown RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 EPHX1P07099 455 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 CASP14P31944 242 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 STK19P49842 368 aaPredicted RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 ZNF143P52747 638 aaPredicted RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 CDH4P55283 916 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 NRG1Q02297 640 aaPredicted RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 SPEM2Q0P670 501 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 FNDC3BQ53EP0 1204 aaKnown RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 PLA2G2CQ5R387 149 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 TMPRSS6Q8IU80 811 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 KIAA2013Q8IYS2 634 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 PGBD3Q8N328 593 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 PSMB7Q99436 277 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 FEM1AQ9BSK4 669 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 TMEM51Q9NW97 253 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 USP36Q9P275 1121 aaKnown RBP17.82■□□□□ 0.44
MBD1-221ENST00000589867 ARHGAP20Q9P2F6 1191 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 GMEB2Q9UKD1 530 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 PLA2G4CQ9UP65 541 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 ERVW-1Q9UQF0 538 aa17.82■□□□□ 0.44
MBD1-221ENST00000589867 TTC34A8MYJ7 566 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms