RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 EEF2KO00418 725 aaKnown RBP23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 KRT86O43790 486 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 RARAP10276 462 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 COMTP21964 271 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 EPHB2P29323 1055 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 GRIA2P42262 883 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 CDH4P55283 916 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 NRG1Q02297 640 aaPredicted RBP23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 ZNF177Q13360 481 aaPredicted RBP23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 GGA2Q9UJY4 613 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 GUCA1BQ9UMX6 200 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 PPP2R2CQ9Y2T4 447 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 ATG2BQ96BY7 2078 aa23.11■■□□□ 1.29
R3HDM4-205ENST00000589445 MUC22E2RYF6 1773 aaPredicted RBP23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 IGLV3-10A0A075B6K4 115 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 H3BRJ5 948 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 CLDN11O75508 207 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 DCNP07585 359 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 RHOCP08134 193 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 KRT7P08729 469 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 PABPC1P11940 636 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 HLA-FP30511 346 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 CD70P32970 193 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 SLC1A1P43005 524 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 LMAN2Q12907 356 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 GEN1Q17RS7 908 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 BOLA3Q53S33 107 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 NUDT18Q6ZVK8 323 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 PSTKQ8IV42 348 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 CIPCQ9C0C6 399 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 PPARGC1AQ9UBK2 798 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 NEU3Q9UQ49 428 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 SIT1Q9Y3P8 196 aa23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 NYNRINQ9P2P1 1898 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-205ENST00000589445 GRID2IPA4D2P6 1211 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 DAPK3O43293 454 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 KRT1P04264 644 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 GOT1P17174 413 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 OR1E1P30953 314 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 ARL4AP40617 200 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 CSKP41240 450 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 CDH6P55285 790 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 SEMA3BQ13214 749 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 CCINQ13939 588 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 DPYSL2Q16555 572 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 C5orf22Q49AR2 442 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 ODF2Q5BJF6 829 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 FSCBQ5H9T9 825 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 RNF43Q68DV7 783 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 Q6ZS52 159 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 AHI1Q8N157 1196 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 EZH1Q92800 747 aaPredicted RBP23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 CALR3Q96L12 384 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 NELL2Q99435 816 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 MUC3BQ9H195 1237 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 LMAN1LQ9HAT1 526 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 CAPN6Q9Y6Q1 641 aa23.09■■□□□ 1.29
R3HDM4-205ENST00000589445 DRGXA6NNA5 263 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 NCAM2O15394 837 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 FGF10O15520 208 aaPredicted RBP23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 RNF40O75150 1001 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 CISD3P0C7P0 127 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 RHOQP17081 205 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 AOC1P19801 751 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 FUT11Q495W5 492 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 DGKKQ5KSL6 1271 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 CXorf57Q6NSI4 855 aaKnown RBP23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 RHOT1Q8IXI2 618 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 FBXL6Q8N531 539 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 FIBINQ8TAL6 211 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 WFIKKN2Q8TEU8 576 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 CALN1Q9BXU9 219 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 CATSPERBQ9H7T0 1116 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 PCDH18Q9HCL0 1135 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 ZDHHC4Q9NPG8 344 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 DNAI1Q9UI46 699 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 FBXO10Q9UK96 956 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 SLC27A6Q9Y2P4 619 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 ALG6Q9Y672 507 aa23.08■■□□□ 1.29
R3HDM4-205ENST00000589445 LRRD1A4D1F6 860 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 PALMO75781 387 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 CHRNB1P11230 501 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 ATP13A4Q4VNC1 1196 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 C6orf118Q5T5N4 469 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 RNF219Q5W0B1 726 aaPredicted RBP23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 RFX8Q6ZV50 586 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 POLNQ7Z5Q5 900 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 KIAA1522Q9P206 1035 aaPredicted RBP23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF318Q5VUA4 2279 aa23.07■■□□□ 1.28
R3HDM4-205ENST00000589445 PRRT4C9JH25 899 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 K7EQS6 105 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 PSTPIP1O43586 416 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 HOXC13P31276 330 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 HTR7P34969 479 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 TIE1P35590 1138 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 MAPKAPK2P49137 400 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 C2orf27AQ580R0 203 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 PITRM1Q5JRX3 1037 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 ARTNQ5T4W7 220 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF687Q8N1G0 1237 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms