RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 IGSF8Q969P0 613 aa17.46■□□□□ 0.39
SCAMP4-211ENST00000588907 ASIC4Q96FT7 647 aa17.46■□□□□ 0.39
SCAMP4-211ENST00000588907 EBF3Q9H4W6 596 aa17.46■□□□□ 0.39
SCAMP4-211ENST00000588907 TTC7AQ9ULT0 858 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-211ENST00000588907 SNX10Q9Y5X0 201 aa17.46■□□□□ 0.39
SCAMP4-211ENST00000588907 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 ARNTLO00327 626 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 CACNG3O60359 315 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 TSPAN3O60637 253 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 ZNF189O75820 626 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 LUC7L3O95232 432 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 SRFP11831 508 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 TYRP14679 529 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 ERCC2P18074 760 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 TGM2P21980 687 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 HOXD9P28356 352 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 OR1E1P30953 314 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 NR2C2P49116 596 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 VCPP55072 806 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 RPS24P62847 133 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 SLC12A1Q13621 1099 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 SLC9A4Q6AI14 798 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 RHBDF2Q6PJF5 856 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 NLRP14Q86W24 1093 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 RFX6Q8HWS3 928 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 LRRC49Q8IUZ0 686 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 MFN1Q8IWA4 741 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 SLC44A3Q8N4M1 653 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 TTC13Q8NBP0 860 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 HPS4Q9NQG7 708 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 TBC1D30Q9Y2I9 924 aa17.45■□□□□ 0.38
SCAMP4-211ENST00000588907 H0Y626 953 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 TRDMT1O14717 391 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 DCLK1O15075 740 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 NCAM2O15394 837 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 GLULP15104 373 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 ARSAP15289 507 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 NDST2P52849 883 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 YBEYP58557 167 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 PAFAH1B3Q15102 231 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 PARP15Q460N3 678 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 CCDC181Q5TID7 509 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 TRIM68Q6AZZ1 485 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 SUGP1Q8IWZ8 645 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 UMODL1-AS1Q8N2C9 162 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 RASGEF1CQ8N431 466 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 PCDH19Q8TAB3 1148 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 FIBINQ8TAL6 211 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 ZFYVE19Q96K21 471 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 PSMB7Q99436 277 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 RPP25Q9BUL9 199 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 FRMD8P1Q9BZ68 369 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 C8orf33Q9H7E9 229 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 SLC2A4RGQ9NR83 387 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 MPP6Q9NZW5 540 aa17.44■□□□□ 0.38
SCAMP4-211ENST00000588907 ILVBLA1L0T0 632 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 PGRMC1O00264 195 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 CEP104O60308 925 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 CST8O60676 142 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 RAMP2O60895 175 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 BMP1P13497 986 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 MX2P20592 715 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 AMPD1P23109 780 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 CXCR5P32302 372 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 ZNF211Q13398 564 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 DMC1Q14565 340 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 ALFQ53S48 1182 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 ARTNQ5T4W7 220 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 NUDT18Q6ZVK8 323 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 SLC13A5Q86YT5 568 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 CFAP52Q8N1V2 620 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 CARNMT1Q8N4J0 409 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 RSAD2Q8WXG1 361 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 MAGEH1Q9H213 219 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 KIAA1522Q9P206 1035 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 ZNF212Q9UDV6 495 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 DUSP12Q9UNI6 340 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 SORCS3Q9UPU3 1222 aa17.43■□□□□ 0.38
SCAMP4-211ENST00000588907 CXorf51AA0A1B0GTR3 108 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 APOC4-APOC2K7ER74 178 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 CNTN5O94779 1100 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 APOC2P02655 101 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 RHOCP08134 193 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 PAFAH1B1P43034 410 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 SGSHP51688 502 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 E2F5Q15329 346 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 KAZNQ674X7 775 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 NCBP2-AS2Q69YL0 99 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 TFAP2DQ7Z6R9 452 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 PQLC3Q8N755 202 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 WFIKKN2Q8TEU8 576 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms