RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 TJP2Q9UDY2 1190 aa14.65□□□□□ -0.06
ERCC1-205ENST00000587888 RAXQ9Y2V3 346 aa14.65□□□□□ -0.06
ERCC1-205ENST00000587888 ADAMTS20P59510 1910 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 IGF2RP11717 2491 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 EDDM13A0A1B0GTR0 161 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 TARSL2A2RTX5 802 aaKnown RBP14.64□□□□□ -0.07
ERCC1-205ENST00000587888 TRABD2BA6NFA1 517 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 LRRC72A6NJI9 287 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 BIN1O00499 593 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 VILLO15195 856 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 PCDHGA12O60330 932 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 DFNA5O60443 496 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 DKK1O94907 266 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 LETM1O95202 739 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-205ENST00000587888 APOEP02649 317 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 SRPRAP08240 638 aaKnown RBP14.64□□□□□ -0.07
ERCC1-205ENST00000587888 TACR2P21452 398 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 BMP6P22004 513 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 PSMD8P48556 350 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 GCNT1Q02742 428 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 CYP4F3Q08477 520 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 COL28A1Q2UY09 1125 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 CHSY1Q86X52 802 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 STK40Q8N2I9 435 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 GALNT15Q8N3T1 639 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 OR2T34Q8NGX1 318 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 OR14C36Q8NHC7 312 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 SKA1Q96BD8 255 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 UBE2TQ9NPD8 197 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-205ENST00000587888 CTNND2Q9UQB3 1225 aa14.64□□□□□ -0.07
ERCC1-205ENST00000587888 SYNJ2BP-COX16A0A087WUM0 186 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3DA0A087WVF3 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3IA0A087WXS9 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3EA0A087X179 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3KA0A087X1G2 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 A0A1B0GTQ1 180 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 BICDL2A1A5D9 508 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3FA6NER0 549 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3LB9A6J9 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 WNT9AO14904 365 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 SART1O43290 800 aaKnown RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 MED7O43513 233 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TRUB2O95900 331 aaKnown RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 WNT1P04628 370 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3HP0C7X1 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 USP8P40818 1118 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 PPP1R2P41236 205 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 RPL34P49207 117 aaKnown RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 STK19P49842 368 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 YWHAZP63104 245 aaKnown RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 NNTQ13423 1086 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 ARID5BQ14865 1188 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3GQ6DHY5 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3CQ6IPX1 549 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 DHRS13Q6UX07 377 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 CREBRFQ8IUR6 639 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 TBC1D3Q8IZP1 549 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 AADATQ8N5Z0 425 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 KDM1BQ8NB78 822 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 ZNF606Q8WXB4 792 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 PTPRN2Q92932 1015 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 SRRTQ9BXP5 876 aaKnown RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 SLC4A5Q9BY07 1137 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 INTS2Q9H0H0 1204 aaKnown RBP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 POPDC2Q9HBU9 364 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 ACP6Q9NPH0 428 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 COX16Q9P0S2 106 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 FTSJ1Q9UET6 329 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 SLC12A6Q9UHW9 1150 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 CYTH4Q9UIA0 394 aa14.63□□□□□ -0.07
ERCC1-205ENST00000587888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.63□□□□□ -0.07
ERCC1-205ENST00000587888 E5RJQ4 531 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 F5H5T6 163 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 CBX4O00257 560 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 PAPSS1O43252 624 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-205ENST00000587888 THAP12O43422 761 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 PLXNA2O75051 1894 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 IL1BP01584 269 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 AFPP02771 609 aaKnown RBP14.62□□□□□ -0.07
ERCC1-205ENST00000587888 ITGAVP06756 1048 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 VAV1P15498 845 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 PDGFRAP16234 1089 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 GOT1P17174 413 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 ABCB4P21439 1286 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 CD38P28907 300 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 NNMTP40261 264 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 PITX1P78337 314 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-205ENST00000587888 KCNJ12Q14500 433 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 TAF5Q15542 800 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 INAVAQ3KP66 663 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 SND1Q7KZF4 910 aaKnown RBP eCLIP14.62□□□□□ -0.07
ERCC1-205ENST00000587888 PDZD3Q86UT5 571 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 CIR1Q86X95 450 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-205ENST00000587888 TRIM59Q8IWR1 403 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 ATP6V0D2Q8N8Y2 350 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 STK32AQ8WU08 396 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 RNF34Q969K3 372 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 SERAC1Q96JX3 654 aa14.62□□□□□ -0.07
ERCC1-205ENST00000587888 BTN2A3PQ96KV6 586 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms