RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PPP1R26Q5T8A7 1209 aaPredicted RBP8.89□□□□□ -0.99
SDF2-204ENST00000587338 KANSL1Q7Z3B3 1105 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
SDF2-204ENST00000587338 C12orf56Q8IXR9 622 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 LSMEM2Q8N112 164 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 OR14C36Q8NHC7 312 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 WFDC5Q8TCV5 224 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 TAF4BQ92750 862 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 DEPDC7Q96QD5 511 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 BLZF1Q9H2G9 400 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 CUEDC2Q9H467 287 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 ERVMER34-1Q9H9K5 563 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 THSD1Q9NS62 852 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 FZD4Q9ULV1 537 aa8.89□□□□□ -0.99
SDF2-204ENST00000587338 AHCTF1Q8WYP5 2266 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3DA0A087WVF3 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3IA0A087WXS9 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3EA0A087X179 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3KA0A087X1G2 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3FA6NER0 549 aaPredicted RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 GOLGA6L3A6NEY3 463 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3LB9A6J9 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 FFAR2O15552 330 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 MSI1O43347 362 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBL1XO60907 577 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 CSO75390 466 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 HLA-DRAP01903 254 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3HP0C7X1 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 CASP1P29466 404 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 SLC8A1P32418 973 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 ERVPABLB-1P60509 514 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 CLDN10P78369 228 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 AMPD3Q01432 767 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TYRO3Q06418 890 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 SRSF1Q07955 248 aaKnown RBP eCLIP8.88□□□□□ -0.99
SDF2-204ENST00000587338 NFATC3Q12968 1075 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 ZNF211Q13398 564 aaPredicted RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 E2F4Q16254 413 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 HNRNPA1L2Q32P51 320 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 C6orf132Q5T0Z8 1188 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 ADGRF1Q5T601 910 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3GQ6DHY5 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3CQ6IPX1 549 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 NAPEPLDQ6IQ20 393 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 RFWD3Q6PCD5 774 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 KIAA0907Q7Z7F0 614 aaPredicted RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 TBC1D3Q8IZP1 549 aaPredicted RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 AADATQ8N5Z0 425 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 RNF139Q8WU17 664 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 NDRG1Q92597 394 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 MYO19Q96H55 970 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 VCPIP1Q96JH7 1222 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 DPH1Q9BZG8 443 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 DNAI2Q9GZS0 605 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 POLR1BQ9H9Y6 1135 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 SLC39A2Q9NP94 309 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 OLA1Q9NTK5 396 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 KBTBD4Q9NVX7 518 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 STIM2Q9P246 746 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 KIAA1468Q9P260 1216 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 CGNQ9P2M7 1197 aaKnown RBP8.88□□□□□ -0.99
SDF2-204ENST00000587338 SFMBT1Q9UHJ3 866 aa8.88□□□□□ -0.99
SDF2-204ENST00000587338 A0A1B0GVM2 712 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 TTC34A8MYJ7 566 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 OPA1O60313 960 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 ZBED1O96006 694 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 GOT1P17174 413 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 MAT2AP31153 395 aaKnown RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 CSKP41240 450 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 LSSP48449 732 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 TKTL1P51854 596 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 CUL4BQ13620 913 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 STX1AQ16623 288 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 KNOP1Q1ED39 458 aaKnown RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 KMT5BQ4FZB7 885 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 C3orf38Q5JPI3 329 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 C9orf64Q5T6V5 341 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 CDCP2Q5VXM1 449 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.995e-8■■■□□ 18.9
SDF2-204ENST00000587338 PIGZQ86VD9 579 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 MFN1Q8IWA4 741 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 ELOA2Q8IYF1 753 aaPredicted RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 RNF214Q8ND24 703 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 GOLGA5Q8TBA6 731 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 SNRNP27Q8WVK2 155 aaKnown RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 EDEM1Q92611 657 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 CCDC47Q96A33 483 aaKnown RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 MRGPRX3Q96LB0 322 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 HEXIM2Q96MH2 286 aaKnown RBP8.87□□□□□ -0.99
SDF2-204ENST00000587338 ULBP1Q9BZM6 244 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 NIF3L1Q9GZT8 377 aa8.87□□□□□ -0.99
SDF2-204ENST00000587338 ABCG4Q9H172 646 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms