RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 GJB3O75712 270 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 CER1O95813 267 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 ERBB2P04626 1255 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 CD59P13987 128 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 SIM1P81133 766 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 SULT2A1Q06520 285 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 KCNJ12Q14500 433 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 DRAP1Q14919 205 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 PTPN20Q4JDL3 420 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 HSP90AA4PQ58FG1 418 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 DHX40Q8IX18 779 aaKnown RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 ZNF397Q8NF99 534 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 PRMT1Q99873 361 aaKnown RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 PABPC3Q9H361 631 aaKnown RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 MTG2Q9H4K7 406 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 C6orf106Q9H6K1 298 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 TMEM51Q9NW97 253 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-203ENST00000586495 ITIH6Q6UXX5 1313 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 PNMA6AP0CW24 399 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-203ENST00000586495 EEF1GP26641 437 aaKnown RBP17.51■□□□□ 0.39
TRIM47-203ENST00000586495 MATKP42679 507 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 AFF3P51826 1226 aaKnown RBP17.51■□□□□ 0.39
TRIM47-203ENST00000586495 PLK1P53350 603 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 NME3Q13232 169 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 TEAD4Q15561 434 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 C9orf64Q5T6V5 341 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 KLHDC7AQ5VTJ3 777 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 CLEC17AQ6ZS10 378 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 APCDD1Q8J025 514 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 CCAR2Q8N163 923 aaKnown RBP17.51■□□□□ 0.39
TRIM47-203ENST00000586495 RPRD1AQ96P16 312 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-203ENST00000586495 OSGEPQ9NPF4 335 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 SAMSN1Q9NSI8 373 aaKnown RBP17.51■□□□□ 0.39
TRIM47-203ENST00000586495 FBXL12Q9NXK8 326 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 STAP1Q9ULZ2 295 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 PCDHB9Q9Y5E1 797 aa17.51■□□□□ 0.39
TRIM47-203ENST00000586495 SPAARA0A1B0GVQ0 90 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 TTC34A8MYJ7 566 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 M0QYT0 321 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 FSBPO95073 299 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 TRIM16O95361 564 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 ZNF883P0CG24 379 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 CYP11B1P15538 503 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 PDGFRAP16234 1089 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 CTSOP43234 321 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-203ENST00000586495 KCNMA1Q12791 1236 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 CST6Q15828 149 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 TCP11X2Q5H9J9 407 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 DPY19L2P1Q6NXN4 242 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 FBXL22Q6P050 247 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 C1orf216Q8TAB5 229 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 BIRC7Q96CA5 298 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 RPL10LQ96L21 214 aaKnown RBP17.5■□□□□ 0.39
TRIM47-203ENST00000586495 OMDQ99983 421 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 GAREM1Q9H706 876 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 PLCB1Q9NQ66 1216 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRIM47-203ENST00000586495 SLCO3A1Q9UIG8 710 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 WASF3Q9UPY6 502 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 FHOD1Q9Y613 1164 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 NUMA1Q14980 2115 aa17.5■□□□□ 0.39
TRIM47-203ENST00000586495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 MID1O15344 667 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 SH3BP5O60239 455 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 UCHL3P15374 230 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 CD27P26842 260 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 CDH5P33151 784 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 SCNN1AP37088 669 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 CSNK1EP49674 416 aaKnown RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 ZNF177Q13360 481 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 AUHQ13825 339 aaKnown RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 BRMS1LQ5PSV4 323 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 KIAA0895LQ68EN5 471 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 ERICH1Q86X53 443 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 CIR1Q86X95 450 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 MMAAQ8IVH4 418 aaKnown RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 NAXDQ8IW45 347 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 ENOX1Q8TC92 643 aaKnown RBP17.49■□□□□ 0.39
TRIM47-203ENST00000586495 C18orf8Q96DM3 657 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 SCNM1Q9BWG6 230 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 STK33Q9BYT3 514 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 WDCPQ9H6R7 721 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 PAXBP1Q9Y5B6 917 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 HS3ST4Q9Y661 456 aa17.49■□□□□ 0.39
TRIM47-203ENST00000586495 A0A1B0GVT2 93 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 A0A1W2PP55 124 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 FAM47DPA6NHR8 397 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 LRRC72A6NJI9 287 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 CLDN11O75508 207 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 RNASEH2AO75792 299 aaKnown RBP17.48■□□□□ 0.39
TRIM47-203ENST00000586495 ADH1BP00325 375 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 F9P00740 461 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 TPM2P07951 284 aa17.48■□□□□ 0.39
TRIM47-203ENST00000586495 MZF1P28698 734 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-203ENST00000586495 SLC8A1P32418 973 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms