RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	PRRT4	C9JH25	899 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	POC1B-GALNT4	F8VUJ3	575 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754		H0Y3Z8	333 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	AGPS	O00116	658 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CTIF	O43310	598 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DHH	O43323	396 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SLC3A2	P08195	630 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CHRM5	P08912	532 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PRR35	P0CG20	571 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DRD1	P21728	446 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KEL	P23276	732 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	YY1	P25490	414 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	HTR7	P34969	479 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PRDM15	P57071	1507 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PSG6	Q00889	435 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TLE3	Q04726	772 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TRPC3	Q13507	836 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SHPRH	Q149N8	1683 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MAPRE1	Q15691	268 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SMAD1	Q15797	465 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SUPT20HL1	Q3ZLR7	823 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	AWAT1	Q58HT5	328 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RNASE12	Q5GAN4	147 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MTX3	Q5HYI7	312 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TMEM196	Q5HYL7	178 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	LIN54	Q6MZP7	749 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TMEM88	Q6PEY1	159 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SLC2A7	Q6PXP3	512 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ANKS1B	Q7Z6G8	1248 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	YTHDF3	Q7Z739	585 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GALNT4	Q8N4A0	578 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM71D	Q8N9W8	422 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FSIP1	Q8NA03	581 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MROH1	Q8NDA8	1641 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	AFG1L	Q8WV93	481 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GLMP	Q8WWB7	406 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SH3KBP1	Q96B97	665 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	C5orf34	Q96MH7	638 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ASB2	Q96Q27	587 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CIPC	Q9C0C6	399 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CCDC134	Q9H6E4	229 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	EPS8L2	Q9H6S3	715 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	JMJD4	Q9H9V9	463 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RIC8A	Q9NPQ8	531 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ITM2C	Q9NQX7	267 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MGAT4C	Q9UBM8	478 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DAPP1	Q9UN19	280 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CNTN6	Q9UQ52	1028 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ZBTB1	Q9Y2K1	713 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DERA	Q9Y315	318 aa		4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RRP7A	Q9Y3A4	280 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TET3	O43151	1660 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PIK3C2B	O00750	1634 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	NWD1	Q149M9	1564 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CAMSAP2	Q08AD1	1489 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CCDC141	Q6ZP82	1450 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RRN3P2	A6NIE6	340 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754		H7C1Q1	480 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CES2	O00748	559 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	HOXC11	O43248	304 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	EPB41L2	O43491	1005 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CBFA2T3	O75081	653 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	USP12	O75317	370 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GUCY1B2	O75343	617 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TAF5L	O75529	589 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GCAT	O75600	419 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RNF8	O76064	485 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	LATS1	O95835	1130 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TUBB4A	P04350	444 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DUSP1	P28562	367 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	NTSR1	P30989	418 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CASP2	P42575	452 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ZNF81	P51508	661 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RBM6	P78332	1123 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GOLGA8F	Q08AF8	430 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CCDC15	Q0P6D6	951 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DDX10	Q13206	875 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GRM4	Q14833	912 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TAF5	Q15542	800 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	AASDH	Q4L235	1098 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A2P	Q658T7	463 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ZNF626	Q68DY1	528 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ZNF772	Q68DY9	489 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MIS18BP1	Q6P0N0	1132 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	WDR93	Q6P2C0	686 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KIRREL2	Q6UWL6	708 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GLCCI1	Q86VQ1	547 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TSPYL6	Q8N831	410 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	C11orf44	Q8N8P7	122 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TERB1	Q8NA31	727 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SRFBP1	Q8NEF9	429 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	OR52L2P	Q8NGH6	319 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MPP4	Q96JB8	637 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RITA1	Q96K30	269 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CCDC17	Q96LX7	622 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PIGS	Q96S52	555 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms