RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TRNP1Q6NT89 227 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 ERMP1Q7Z2K6 904 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 SYT12Q8IV01 421 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 APCDD1Q8J025 514 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 IGSF8Q969P0 613 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 CFAP57Q96MR6 1250 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 TMEM51Q9NW97 253 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 ARHGEF38Q9NXL2 777 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 ERVW-1Q9UQF0 538 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.06■□□□□ 0.96
SS18-224ENST00000584083 PATE3B3GLJ2 98 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 SLC30A4O14863 429 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 SERPINC1P01008 464 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 UNGP13051 313 aaPredicted RBP21.06■□□□□ 0.96
SS18-224ENST00000584083 PDGFRAP16234 1089 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 FERP16591 822 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 ITPKAP23677 461 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 DPP6P42658 865 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 CTSOP43234 321 aaPredicted RBP21.06■□□□□ 0.96
SS18-224ENST00000584083 TPMTP51580 245 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 OXCT1P55809 520 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 ECT2LQ008S8 904 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 ZNF33AQ06730 810 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 ZNF177Q13360 481 aaPredicted RBP21.06■□□□□ 0.96
SS18-224ENST00000584083 SLC12A1Q13621 1099 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 IQCB1Q15051 598 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 CLEC16AQ2KHT3 1053 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 PLEKHG6Q3KR16 790 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 ARCQ7LC44 396 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 C14orf80Q86SX3 495 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 EMC1Q8N766 993 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 TOE1Q96GM8 510 aaKnown RBP21.06■□□□□ 0.96
SS18-224ENST00000584083 HSPA12BQ96MM6 686 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 AGPAT1Q99943 283 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 FBRSQ9HAH7 460 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 PRSS16Q9NQE7 514 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 ADAM22Q9P0K1 906 aa21.06■□□□□ 0.96
SS18-224ENST00000584083 USP36Q9P275 1121 aaKnown RBP21.06■□□□□ 0.96
SS18-224ENST00000584083 ATXN2Q99700 1313 aaKnown RBP21.05■□□□□ 0.96
SS18-224ENST00000584083 DCHS1Q96JQ0 3298 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 DCDC2BA2VCK2 349 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 SRPRAP08240 638 aaKnown RBP21.05■□□□□ 0.96
SS18-224ENST00000584083 MZF1P28698 734 aaPredicted RBP21.05■□□□□ 0.96
SS18-224ENST00000584083 OXTRP30559 389 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 RDXP35241 583 aaKnown RBP21.05■□□□□ 0.96
SS18-224ENST00000584083 NUMBP49757 651 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 IRAK1P51617 712 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 TPM4P67936 248 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 ATP11AP98196 1134 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 STPG1Q5TH74 334 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 IL31Q6EBC2 164 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 MRGPRX3Q96LB0 322 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 PPP1R9BQ96SB3 815 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 EDEM2Q9BV94 578 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 MTG2Q9H4K7 406 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 ANLNQ9NQW6 1124 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 TMEM74BQ9NUR3 256 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 PILRBQ9UKJ0 227 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 SNX10Q9Y5X0 201 aa21.05■□□□□ 0.96
SS18-224ENST00000584083 LIMK1P53667 647 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 TRIM61Q5EBN2 209 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 CXorf57Q6NSI4 855 aaKnown RBP21.04■□□□□ 0.96
SS18-224ENST00000584083 LRRC31Q6UY01 552 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 FAM124AQ86V42 546 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 SLC41A1Q8IVJ1 513 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 RXFP2Q8WXD0 754 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 MYO19Q96H55 970 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 RPL10LQ96L21 214 aaKnown RBP21.04■□□□□ 0.96
SS18-224ENST00000584083 NAP1L5Q96NT1 182 aaPredicted RBP21.04■□□□□ 0.96
SS18-224ENST00000584083 NUP58Q9BVL2 599 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 GPR174Q9BXC1 333 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 CBX8Q9HC52 389 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 TMPRSS4Q9NRS4 437 aa21.04■□□□□ 0.96
SS18-224ENST00000584083 WSB2Q9NYS7 404 aaPredicted RBP21.04■□□□□ 0.96
SS18-224ENST00000584083 LNP1A1A4G5 178 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 I6L893 689 aaPredicted RBP21.03■□□□□ 0.96
SS18-224ENST00000584083 CLDN11O75508 207 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 GJB6O95452 261 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 DNTTP04053 509 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 CFIP05156 583 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 CALB1P05937 261 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 SDC4P31431 198 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 NNMTP40261 264 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 RPS14P62263 151 aaKnown RBP21.03■□□□□ 0.96
SS18-224ENST00000584083 IRX4P78413 519 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 PTP4A2Q12974 167 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 CDO1Q16878 200 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 HNRNPA1L2Q32P51 320 aaKnown RBP21.03■□□□□ 0.96
SS18-224ENST00000584083 SYCP2LQ5T4T6 812 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 FAM131BQ86XD5 332 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 PHF13Q86YI8 300 aaPredicted RBP21.03■□□□□ 0.96
SS18-224ENST00000584083 RGL4Q8IZJ4 473 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 KDM1BQ8NB78 822 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 JOSD2Q8TAC2 188 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 FOXJ1Q92949 421 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 ZNF419Q96HQ0 510 aaPredicted RBP21.03■□□□□ 0.96
SS18-224ENST00000584083 SELENOOQ9BVL4 669 aa21.03■□□□□ 0.96
SS18-224ENST00000584083 NUSAP1Q9BXS6 441 aaKnown RBP21.03■□□□□ 0.96
SS18-224ENST00000584083 SLCO3A1Q9UIG8 710 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms